Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2647 ATGGCGACGGCGAAGACATCTCGGACGAGAAGTGCAGTGGCGAGTGCGAAGGAGAATGGACCTAAGCTTGAAGAAGGACTCAATCCCTTCAAGACTGAGAAATTCGACGCGGAGTCCTATGTGCAGTCCAATTGCTCCCTCAACGATAAGGAAATTAAGCAATTATGCACATATTTGGTGGACTTGAAGAAGGCATCTGCTGAGGAGATGCGTCGAAGTGTCTATGCTAATTATGCTGCCTTCATTCGAACATCCAAGGAGATATCAGATTTGGAGGGGGAGCTTTCATCTATTAGAAACCTTCTCTCCACACAAGCTGCCTTGATACATGGTTTAGCTGAAGGAGTTCACATCGATTCATTATCAATTTCAACGTCTGATGGTTTTTCTCTAAATGCTACATCAGATTCTGAAGATAAGGAGATATCAGACCTAGACAAATGGTTGGTAGAGTTTCCTGATCTCTTGGATGTTCTCTTGGCTGAAAGGCGAGTGGAAGAGGCTTTGGCTGCTCTTGATGAAGGAGAGCGTGTAGTTTCTGAGGCTAAAGAGATGAAATCTATCACCCCGTCAGTACTTTTGTCTCTACAGAATTCCATTGCTGAACGTAGACAAAAGCTAGCCGATCAGCTAACTGAAGCTGCTTGTCAGCCCTCCACACGTGGTTCTGAGCTCCGTGCATCGGTTTCCGCCCTTAAAAGACTTGGAGATGGTCCCCATGCCCACAGCTTGCTACTTAATGCCCATCAGCAACGGTATCAATATAACATGCAAATTCTTCGACCATCAAGCACCTCATATGGTGGAGCATATACTGCTGCTCTAGCCCAACTGGTATTCTCAGTAGTTGCTCAAGCTGCTAGTGATTCTTTGGCTATTTTCGGTGAGGAGCCAGCTTATACTTCAGAACTTGTGATGTGGGCTACTAAGCAAACAGAAGCTTTTGCTCTTCTAGTGAAAAGGCATGCATTAGCTTCATCAGCAGCTGCAGGAGGTTTAAGAGCTGCTGCAGAATGTGTTCAAATAGCATTGGGTCATTGCTCATTGTTGGAAGCTCGTGGTCTGGCTCTTTGTCCCGTGCTGTTGAAACTTTTTAGGCCTAGTGTTGAGCAAGCACTAGATGCTAATTTGAAACGAATTCAAGAGAGTACTGCTGCTTTGGCTGCAGCTGATGACTGGGTACTTACATACCCTCCTACAGCTAGTCGTCAGAGTAGTAGGCCTTCAAGTATATCCATGAGTAATACAACCGCATTTCAACATAAACTTACAAGCAGTGCCCATCGCTTCAATTTGATGGTTCAGGACTTCTTCGAGGATGTAGGACCACTGCTTAGCATGCAGTTGGGGGGCCAAGCCCTGGAGGGATTGTTTCAAGTATTTAACTCCTATGTGAACATGCTCATAAAAGCATTACCTGGATCAATGGAGGAAGAGGCAGGCTTTGAAGATTCTGGAAACAAAATTGTACGCATGGCTGAGACTGAGAACCAGCAAATTGCATTGCTAGCAAATGCCTCATTACTAGCTGATGAACTACTTCCACGTGCAGCTATGAAGCTTTCCCCCATAAATCAAAATGCCTACAATGATGATAATCGAAGAAGAACCTCAGAAAGACAAAATCGTCATCCTGAACAAAGAGAATGGAGGAGAAGACTTGTTGGTTCAGTGGACAGATTAAAAGATACATTCTGTCGTCAACATGCACTGGACCTAATTTTTACTGAGGAAGGTGATAGTCATCTTACTGCTGACATGTATATAAATATGGATGGTAATGCCGAAGACGTTGAATGGCTTCCATCTTTTATTTTTCAGGAGCTTTTTGTAAAACTAAACCGAATGGCCAATATAGCAGCAGATATGTTTGTAGGGAGGGAAAGATTTGCTACGCTGCTCTTGATGAGACTTACAGAAACTGTTATGTTGTGGCTTTCAGAAGACCAGAGCTTTTGGGATGATATTGAGGAAGGGCCCAGGCCTTTAGGTCCCCTTGGTCTTCAGCAGTTCTACCTGGATATGAAGTTTGTCGTATGCTTTGCTTCGCACGGTCGATACTTGTCAAGAAATTTGCAACGAATTGTCAACGAGATTATAACAAAAGCGATGGCGGCATTTTCTGCAACAGGGATGGATCCATATAGAGAACTGCCAGAAGACGAATGGTTTAACGACTTATGTCAAGATGCAATGGAGAGACTTAGTGGAAAGCCAAAAGAAATAAATGGGGAGAAGGACCCTAACAGCCCTACTGCATCTGTTTCTGCTCAGTCAATTTCATCTGTCAGATCGCATAATAGTTCGTGA 2310 0.4403 MATAKTSRTRSAVASAKENGPKLEEGLNPFKTEKFDAESYVQSNCSLNDKEIKQLCTYLVDLKKASAEEMRRSVYANYAAFIRTSKEISDLEGELSSIRNLLSTQAALIHGLAEGVHIDSLSISTSDGFSLNATSDSEDKEISDLDKWLVEFPDLLDVLLAERRVEEALAALDEGERVVSEAKEMKSITPSVLLSLQNSIAERRQKLADQLTEAACQPSTRGSELRASVSALKRLGDGPHAHSLLLNAHQQRYQYNMQILRPSSTSYGGAYTAALAQLVFSVVAQAASDSLAIFGEEPAYTSELVMWATKQTEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAALAAADDWVLTYPPTASRQSSRPSSISMSNTTAFQHKLTSSAHRFNLMVQDFFEDVGPLLSMQLGGQALEGLFQVFNSYVNMLIKALPGSMEEEAGFEDSGNKIVRMAETENQQIALLANASLLADELLPRAAMKLSPINQNAYNDDNRRRTSERQNRHPEQREWRRRLVGSVDRLKDTFCRQHALDLIFTEEGDSHLTADMYINMDGNAEDVEWLPSFIFQELFVKLNRMANIAADMFVGRERFATLLLMRLTETVMLWLSEDQSFWDDIEEGPRPLGPLGLQQFYLDMKFVVCFASHGRYLSRNLQRIVNEIITKAMAAFSATGMDPYRELPEDEWFNDLCQDAMERLSGKPKEINGEKDPNSPTASVSAQSISSVRSHNSS* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2647 769 SUPERFAMILY Cullin repeat-like 139 373 IPR016159 -
Pvu8g2647 769 MobiDBLite consensus disorder prediction 525 548 - -
Pvu8g2647 769 Pfam Exocyst component 84 C-terminal 147 356 IPR032403 -
Pvu8g2647 769 MobiDBLite consensus disorder prediction 735 769 - -
Pvu8g2647 769 MobiDBLite consensus disorder prediction 532 548 - -
Pvu8g2647 769 Gene3D - 134 257 IPR042561 -
Pvu8g2647 769 MobiDBLite consensus disorder prediction 1 27 - -
Pvu8g2647 769 Pfam Vps51/Vps67 30 109 - -
Pvu8g2647 769 Gene3D - 268 372 IPR042560 -
Pvu8g2647 769 PANTHER EXOCYST COMPLEX COMPONENT 8 8 764 IPR033961 GO:0000145|GO:0006887
Pvu8g2647 769 Coils Coil 165 185 - -
Pvu8g2647 769 MobiDBLite consensus disorder prediction 747 769 - -
Pvu8g2647 769 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 8 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2647 Pvu-Chr8 56930160 56939373 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2647 K19986 - gmx:100820599 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2647 8 56930160 56939373 Pvu8g2647 8 56930160 56939373 ECH