Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2535 ATGTATCTTTCAAAGGGTTGTAAGTGTGAAGAAGCTGTTCTTCTGTGCTTGTGTTTCTTCTGCTATTTTCTATTTGCTACTGCTTTGATCACTGATCCCACCGAAGTTGACGCATTAAGAACCATAAAGAGAAGTTTGATTGATACTAATGGAAATTTGAGCAACTGGGATCGTGGAGATCCTTGTACATCTAACTGGACAGGAGTCATGTGCTCGGATACAACGTTAGTCGATGGCTATCTACATGTTAGAGAACTTCAACTCGATAACAATAACTTCGATGGAAATAGCATGCCAGAATCTTATGCCAACATGTCAAAATTGTTGAAATTGAACTGCAACTTGAAAGGACCAATTCCTGATTTCAGCAGGATACCACACCTTACTTACCTTGACCTTAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTATCAGACATTGACTTATCAAACAACAAGTTCAATGGAACAATTCCAACCTACTTTTCTAGTCTTCCACGTCTTCAGAAATTGTCAGTTCCAAACAATTCAATTAGTGGTACTGTTCCCTCTACCATTTGGCAGAACAGAACTTTAAATGCAACCGAGGAACTTATCTTATACATGCAGCATAATCAACTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATCTCACACTTATGCTTGAGGGAAATCCTGTATGTTCGAATAATAACTCCTTTGTTCAGTTCTGTGGACGTGAAATCAAGGATACCCCTTCTTATGAATACAATGTGGAGTGTATCAGTGTTGCCCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGTTTTTCAGATTTCCGTGCATATGTGAAAAAATTTGAGAACTTCCTGACAGATGGTCTTAGTATGCATACTAATCAGCTGTTCATTGAGCGTTTTACATGGGAAGAAGGGCGGTTGAGAATGAACTTGAAGCTTTTTCCAGAATATGTGGACAATACAAGTTCTCGTGAGTTCAGTACAGGTGAGGTTATTCGGATTAGGGACATAAAACCCAAAATACTCCAAGAACACAGAAAAGAACTGAATAACCTCTGTTTATTCCCACCCCGCCGTACAATCAGAACAATCACAAAGGAAACACTGATTTCACACAGGACTTCTCCTGTCAACGAAACTGTAATCCTAAAACCAGTTGGTCTTTATTTAAAGACCAACCATAACCAACTAACTAACCAACTCCCTTACCCTTTATTTTTAAGTGCAATTGCCTGTGCACTTACATTATCTGCAGTTGTTTCCATTCTTATTTTGAGAATACGCTTGAGAGATTATCGTGCACTTTCCAAGCGGCGTAACGCATCTAGGATCTCGCTAAAAGTTGAAGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGGTACAAACAATTTTAGTGAGTCTGCTCAAATTGGAGAAGGGGGTTATGGGAAGCCGTGTCCCGTGTCCTATAATTTTCAGTTTAGCCGTATCTCCGTGTCCGTATCTGTGTCGTATCCGTGCCCGTATCTGAGGGATTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCACCGCAACCTTGTGTCTCTGATTGGATACTGTGACGAAGAGGGTGAACAGATGTTAGTCTATGAATATATGCCAAATGGAACCCTAAGGGATCACCTTTCTGCTTATTCAAAAGATGTTCTTAGTTTTTCTATGAGGTTAAAGATTGCTCTAGGATCAGCAAAAGGTCTTCTATATCTGCACACAGAAGCTAATCCTCCAATATTCCACCGAGACGTGAAGGCGAGCAATATATTATTGGACTGTAGGTACACAGCAAAAGTTGCCGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGCTCATGTATCCACTGTGGGTTACCTTGATCCAGAGTACTTCTTAACACGTAATTTGACTGACAAAAGTGATGTTTACAGTCTGGGTGTTGTATTTTTGGAACTTTTGACAGGAAGGCCACCAATCTTTCATGGAGAAAATATAATTAGACAGTCAATTCAGTCAACTTGGTTTAACTGTGTACAAGTTAATATGGCATACCAATCTGGTGGAATTTATCTGGTTGTTGATAAACGTATTGAGTCTTATCCATTTAAGTATGCAGTGAGATTTTTTACTTTAGCCTTAAAGTGTTGCAAAGATTTACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATCTGTTCTATGTTACTTGAGCCAGATTCCAAGGGAGTTGAATATGTTACAAGTGATTCTTCTGGTACAATATTGAGTTCACAACCTTCATCATCTACTATAAACACTCATTTTATTTCAGGAGATGTGTCAAGTAGTGACCTTGCCAGTGGAAGTGCACCAACCATCAAACCAAGATAG 2430 0.3926 MYLSKGCKCEEAVLLCLCFFCYFLFATALITDPTEVDALRTIKRSLIDTNGNLSNWDRGDPCTSNWTGVMCSDTTLVDGYLHVRELQLDNNNFDGNSMPESYANMSKLLKLNCNLKGPIPDFSRIPHLTYLDLSFNQLNESIPTNKLSDIDLSNNKFNGTIPTYFSSLPRLQKLSVPNNSISGTVPSTIWQNRTLNATEELILYMQHNQLTSISGSTNLPPNLTLMLEGNPVCSNNNSFVQFCGREIKDTPSYEYNVECISVAPLIVHYRLKSPGFSDFRAYVKKFENFLTDGLSMHTNQLFIERFTWEEGRLRMNLKLFPEYVDNTSSREFSTGEVIRIRDIKPKILQEHRKELNNLCLFPPRRTIRTITKETLISHRTSPVNETVILKPVGLYLKTNHNQLTNQLPYPLFLSAIACALTLSAVVSILILRIRLRDYRALSKRRNASRISLKVEGVRSFDYKEMALGTNNFSESAQIGEGGYGKPCPVSYNFQFSRISVSVSVSYPCPYLRDFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKDVLSFSMRLKIALGSAKGLLYLHTEANPPIFHRDVKASNILLDCRYTAKVADFGLSRLAPVPDIEGNVPAHVSTVGYLDPEYFLTRNLTDKSDVYSLGVVFLELLTGRPPIFHGENIIRQSIQSTWFNCVQVNMAYQSGGIYLVVDKRIESYPFKYAVRFFTLALKCCKDLPDERPKMAEVARELEYICSMLLEPDSKGVEYVTSDSSGTILSSQPSSSTINTHFISGDVSSSDLASGSAPTIKPR* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2535 809 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 88 - -
Pvu8g2535 809 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 86 785 - -
Pvu8g2535 809 SUPERFAMILY Protein kinase-like (PK-like) 446 749 IPR011009 -
Pvu8g2535 809 Gene3D Phosphorylase Kinase; domain 1 442 548 - -
Pvu8g2535 809 Pfam Protein tyrosine and serine/threonine kinase 477 748 IPR001245 GO:0004672|GO:0006468
Pvu8g2535 809 ProSiteProfiles Protein kinase domain profile. 472 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g2535 809 Gene3D Ribonuclease Inhibitor 31 255 IPR032675 -
Pvu8g2535 809 SUPERFAMILY L domain-like 32 228 - -
Pvu8g2535 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Pvu8g2535 809 Gene3D Transferase(Phosphotransferase) domain 1 549 762 - -
Pvu8g2535 809 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 86 785 - -
Pvu8g2535 809 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 14 88 - -
Pvu8g2535 809 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Pvu8g2535 809 SMART serkin_6 472 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2535 Pvu-Chr8 55920187 55928747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2535 86 749 Receptor kinase-like Gene Family AT5G01950 45.787 2.42e-171 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu8g2535 PK_Tyr_Ser-Thr 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2535 - - pvu:PHAVU_008G245000g 1604.34