Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2512 ATGGTGTGGGGACTCTTCCCCGTTGATCCTCTTTCAGGTGAAGATAACTACTATATTTTCAAAACTGGAATTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGTGTTTCTCGGGTTCATGCAGAAATAATTGTTAATAAAATGAACCTGGTAAATCCTTTACCAAATGAATGTTCTCATTTGTCACCCAGTATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAGAATGTTGGGCCCAAGAAAAAAGTTCATGAGCTACCAAACAAGCAAACGCCACTAGAGGATGGCGACCTTGTTTCTTTTGGCACTGGTAGTGCTACCTACAAGTTTTGCCATGTACCCCTCGTTTTTTTCATCTGTTGCTCAAATAAAGTGGATCTTCAAGAGAAAATTTCATCAATTGGTGCTAGTTTTACTCATACCTTAGGTGAAGGGTGCACACATGTGCTGGTAGATCAACTCATGCCGTTGAAGAAGGATCTTGTTGATGCTGTTGTGGCAAAAAAATCTTGTGTTCTCCAAAATTGGCTTGAGTTTTTTGCAGAAAAGAATATCAGCACCGAAATTCCTAGCTGTCATTCATATATTCCAACAGTGTCAGTGGACGGAGAATCTATTAAAATTGCTGACCCCAGGTCGCGTGAAGATTGCATGAAAGGATACACATTTTTGTTGGAATCTGAGCATTTGTATAAATTTCGGGATCAGCTAAAATCTTTATTGGAGGTGGCTGGTGCAAAAGTTGTTTCCGCTGGAGATTTTTGTTCAAATAGTCAAGCTTCAAATTACGGAGAGGATAATCGTGTGGTTTGTGTCATCCCAGAAGGACCAGCATGCAAGACTAATCTTTTTGATAAACTGAGTTCCTTGCTTAGAGTTAGTGAGATGGATATACTTTGTGCTGCTTTCAGTGGACAGCTAGATCTGTCTACCTTTAAATCACCATGCATACTTGTTTCGTCTTCATGCTCTACAGATGAGACAATTGTAGCAGATTCAGATACTGAAGTTGAAACAGCCACATCAGCGCGCTCAACTGAGGCATTAAGCAACGACAATAATGTAAAATGTGGAAAAACAGAAGAAATATATGATGATTCTTGCACTTTGGATAAGAGAAAACATGATAGTATAGAGGCATCCTCAGATGATGTTTTAACCAGATTGCATGACATTAAACGTGCAAAAACAGAAACATCCTTGGATGGTGCTTCTGTCAGATCACATGCTACCAGCTTCAGTAACGATAATGTTGGTGTCAAAGTAAAGAAAGACAAGGTTGATGATAATGAAACTGGAAATTCAGATGTTGTTTATAGCCAACATTTAATTGTTCGAGATACAAACATACGGAGTAGCGTAAGCACTGCACCAGACAGCAGTTTTCCAAATTTTAAATGTTTCAGAAAGGCACACACTCAATCTGGTAATAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGACTGCGGGGATGACGAAATGTCTGAGTTAGTGAAGGAGGAAAAAAGGCGAAAGAAAATGGAAGCTGTCGCAGATGACCTATTTAATAATGAGAAGACAAGGAAACGAGGCACAGGTGGTTCACGAGGCACTGTTGGTTCTCTTCGTAGCATTCTTTCTTCATGA 1674 0.3907 MVWGLFPVDPLSGEDNYYIFKTGIYKVGRKGCDVIITKDKGVSRVHAEIIVNKMNLVNPLPNECSHLSPSIHIRDCSKYGTFISKNVGPKKKVHELPNKQTPLEDGDLVSFGTGSATYKFCHVPLVFFICCSNKVDLQEKISSIGASFTHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLQNWLEFFAEKNISTEIPSCHSYIPTVSVDGESIKIADPRSREDCMKGYTFLLESEHLYKFRDQLKSLLEVAGAKVVSAGDFCSNSQASNYGEDNRVVCVIPEGPACKTNLFDKLSSLLRVSEMDILCAAFSGQLDLSTFKSPCILVSSSCSTDETIVADSDTEVETATSARSTEALSNDNNVKCGKTEEIYDDSCTLDKRKHDSIEASSDDVLTRLHDIKRAKTETSLDGASVRSHATSFSNDNVGVKVKKDKVDDNETGNSDVVYSQHLIVRDTNIRSSVSTAPDSSFPNFKCFRKAHTQSGNSFDNLVPFAKYPYKDSDCGDDEMSELVKEEKRRKKMEAVADDLFNNEKTRKRGTGGSRGTVGSLRSILSS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2512 557 CDD BRCT 127 188 - -
Pvu8g2512 557 Pfam FHA domain 25 112 IPR000253 GO:0005515
Pvu8g2512 557 SUPERFAMILY BRCT domain 128 188 IPR036420 -
Pvu8g2512 557 MobiDBLite consensus disorder prediction 517 557 - -
Pvu8g2512 557 MobiDBLite consensus disorder prediction 517 541 - -
Pvu8g2512 557 PANTHER NIBRIN-RELATED 2 538 IPR040227 GO:0006302|GO:0007095|GO:0030870
Pvu8g2512 557 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Pvu8g2512 557 Coils Coil 513 533 - -
Pvu8g2512 557 Gene3D - 4 122 - -
Pvu8g2512 557 SUPERFAMILY SMAD/FHA domain 17 125 IPR008984 GO:0005515
Pvu8g2512 557 CDD FHA 2 120 IPR000253 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2512 K10867 - gmx:100783205 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2512 8 55700018 55708330 Pvu8g2512 8 55700018 55708330 ECH