Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2510 ATGGATCAGCTCAAACCAAGCGCTGCTAACACTTCTCCTCTCACACCACTAGGTTTCTTGGACAGAGCCGCCACCGTTTACGGCGACGTCCCTTCCGTTGTCTACAACCACACAACCTTCACCTGGGACCAAACGCGCCGCCGATGCATCCAGCTCGCCTCCGCCATCTCCTCCCTAGGAATCCGCCGCGGCAGCGTCGTCTCCGTCGTCGCTCCCAACATCCCGGCCATGTACGAGCTCCAGTTTTCCATCCCCTTTGCCGGCGCTATTCTCAACAACATCAACCTCCGCCTCGACGCCCGCACAATCTCTGTCATCCTACGCCATGCGAACTCCACGCTCGTCTTCGTCGACTGCGCCTCCCGCGACCTCGTCCTCGAAGCCGTGTCCCTCTTCCCTAAACACCACACTCAACGCCCTCTCCTGGTTCTCATCGCCGACGAGAGTGTCGAAAACGCAAACGTCTCAAGCACCGGTGATTTCGTTGACACATACGAGGGCCTAGTGAGCAAGGGCGATCCGAACTTTGAGTGGGTCCGGCCCAAATCGGAGTGGGACCCGATGATACTTAACTACACGTCGGGAACGACGTCGTCTCCGAAAGGCGTTGTTCACTCCCACAGAGGAATCTTTATAGTCTCCGTCGACACGCTTATCGACTGGGCAGTTTCCAAGCGCCCCAATTATCTATGGACGCTCCCGATATTCCACGCTAACGGCTGGAGCCTCCCGTGGGGAATCGCTGCCTTGGGCGGCACCAACATCTGCGTCCGCAAGTTCGATGCTGAGATTATTTACTCTCACATAAAACGACATCACGTGACACACATGTGCGGCGCGCCGGTGGTGCTCAGCATGTTGACAAACTCCCCGGACAACAAACCTTTGGAGAAACCGGTTCATATACTGACCGCGGGAGCACCGCCGCCAGCGGCGGTGCTCCACCGGACGGAGGCGCTGGGGTTTGTGGTGAGCCACGGATACGGACTGACCGAAACCGGGGGGCTGGTGGTGTCGTGCGCGTGGAAGGAGAAGTGGAACCGGCTGCCGGCGGCGGAGCGGGCGCGGCTGAAGGCGAGGCAGGGAGTGAGGACGGTGGGGATGGCGGAGATTGACGTGGTGGGTCCGACCGGGGAGAGCGTGAAGCGCGACGGGGTGAGCGTCGGGGAGGTTGTGATGAGAGGAGGGAGCTTGATGTTGGGATACCTTAAAGACCCCGAAGGAACCGCGAGTTGTTTGAAAAACGGGTGGTTCTACACGGGGGATGTCGGAGTGATGCATGAGGACGGGTATTTGGAAATTAAGGACAGGTCAAAGGATGTGATCATCAGCGGCGGCGAGAACCTGAGCAGCGTGGAGGTGGAATCGATTTTGTACGGGCACCCGGCGGTGGCGGAGGCTGCGGTGGTGGCGCGACCGCACGAGTATTGGGGAGAGACACCGTGCGCGTTCGTGAGCTTGAAGACGGGGTTGAAAGAGAAAGAGAAACCCAGTGAGGATGACATAATAAAGTACTGCAGGGAAAAGATGCCGCATTATATGGTTCCGAAGACGGTGGTTTTCAAGGATGAACTTCCGAAGACATCCACAGGGAAGATCCAGAAGTTTGTCCTGAGACAGATTGCGAAGGAGATGGGTTCCTTCACGCAAAGTAGAATCTGA 1662 0.5788 MDQLKPSAANTSPLTPLGFLDRAATVYGDVPSVVYNHTTFTWDQTRRRCIQLASAISSLGIRRGSVVSVVAPNIPAMYELQFSIPFAGAILNNINLRLDARTISVILRHANSTLVFVDCASRDLVLEAVSLFPKHHTQRPLLVLIADESVENANVSSTGDFVDTYEGLVSKGDPNFEWVRPKSEWDPMILNYTSGTTSSPKGVVHSHRGIFIVSVDTLIDWAVSKRPNYLWTLPIFHANGWSLPWGIAALGGTNICVRKFDAEIIYSHIKRHHVTHMCGAPVVLSMLTNSPDNKPLEKPVHILTAGAPPPAAVLHRTEALGFVVSHGYGLTETGGLVVSCAWKEKWNRLPAAERARLKARQGVRTVGMAEIDVVGPTGESVKRDGVSVGEVVMRGGSLMLGYLKDPEGTASCLKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESILYGHPAVAEAAVVARPHEYWGETPCAFVSLKTGLKEKEKPSEDDIIKYCREKMPHYMVPKTVVFKDELPKTSTGKIQKFVLRQIAKEMGSFTQSRI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2510 553 Pfam AMP-binding enzyme 21 444 IPR000873 -
Pvu8g2510 553 SUPERFAMILY Acetyl-CoA synthetase-like 11 544 - -
Pvu8g2510 553 Pfam AMP-binding enzyme C-terminal domain 453 532 IPR025110 -
Pvu8g2510 553 Gene3D - 2 439 IPR042099 -
Pvu8g2510 553 PANTHER LONG-CHAIN ACYL-COA SYNTHETASE 2 548 - -
Pvu8g2510 553 PANTHER ACYL-ACTIVATING ENZYME 2 548 - -
Pvu8g2510 553 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Pvu8g2510 553 CDD ttLC_FACS_AEE21_like 12 539 - -
Pvu8g2510 553 Gene3D - 440 552 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2510 Pvu-Chr8 55681687 55683768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2510 1 545 EF-hand Containing Proteins AT1G21540 61.887 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2510 - - gmx:100779857 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2510 8 55681687 55683768 Pvu8g2510 8 55681687 55683768 ECH