Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2478 ATGCCGAACACACGCACTGTTGGAGTAGCCATGGACTTTTCTGCCACTAGCAAATTAGCCCTTCGTTGGGCAGTTGAAAATCTCATCAACAAAGGTGATCAAATCATTTTGATCAATGTTCAGCCTCCCCATGCTCATCACACCCGAAAGGAGCTTTTTGAGGTCACTGGTTCACCTTTGGTGCCTTTGGAGGAACTGAGGGAGTTGAATTTTGCTAAGCAATATGGGATTCCTAGGGATCCTGAAGTCATAGATATCCTTGATACTGCCTCCAAGACAAAAGGGGCAAAGGCAGTGGCAAAGGTGTATTGGGGAGATCCAAGAGAGAAGTTGTGTAATGCTGTGGAAGATCTTCACCTCGACTCTTTGGTTATTGGAAGCAGGGGTTTAGGTCCCATTAAAAGGGTGTTGTTGGGCAGTGTAAGCAAGCATGTGATGACAAATGCCTCTTGTCCCGTCACAGTGGTTAAGGCAAAACAATCTTCCCATTGA 492 0.4593 MPNTRTVGVAMDFSATSKLALRWAVENLINKGDQIILINVQPPHAHHTRKELFEVTGSPLVPLEELRELNFAKQYGIPRDPEVIDILDTASKTKGAKAVAKVYWGDPREKLCNAVEDLHLDSLVIGSRGLGPIKRVLLGSVSKHVMTNASCPVTVVKAKQSSH* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2478 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Pvu8g2478 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Pvu8g2478 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Pvu8g2478 163 PANTHER OS02G0773200 PROTEIN 1 160 - -
Pvu8g2478 163 Pfam Universal stress protein family 5 157 IPR006016 -
Pvu8g2478 163 PANTHER IMP2'P 1 160 - -
Pvu8g2478 163 CDD USP_Like 6 156 - -
Pvu8g2478 163 Gene3D HUPs 2 163 IPR014729 -
Pvu8g2478 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 4 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2478 Pvu-Chr8 55376337 55377552 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2478 - - gmx:100500682 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2478 8 55376337 55377552 Pvu8g2478 8 55376337 55377552 ECH