Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2456 ATGTCGCTACTCTCCGATCTTATCAACCTTAACCTCTCCAACACCACCGAGAAGGTGATCGCGGAATACATATGGGTTGGGGGATCTGGTATGGACATGAGGAGTAAAGCAAGGACTCTTTCAGGTCCGGTTAATGACCCTTCCAAGCTTCCCAAATGGAACTATGATGGTTCCAGCACTGGTCAAGCACCTGGAGCTGATAGTGAAGTGTTATTATATCCACAAGCAATTTTCAAGGATCCATTCAGGAGGGGTAAAAATATTCTGGTTATGTGTGATACTTACACTGCTGCTGGGGAACCCATTCCTACCAACAAGAGATATAATGCGGCAAAGATATTTAACCATCCTGATGTTCTTGCTGAAGAACCCTGGTATGGCATTGAGCAAGAATACACCTTGTTGCAGAAAGATGTCAAATGGCCCCTTGGATGGCCTATTGGTGGTTTTCCTGGACCCCAGGGACCCTACTATTGTGGTATTGGTGCTGACAAAGCTTTTGGACGGGACATTGTGAACTCTCATTTCGAAGCCTGTCTTTATGCAGGCATTAATATTACTGGAATTAATGGAGAAGTGATGCCCGCTCAGTGGGAATTCCAAATTGGTCCATCGGCTGGAATCTCTGCGTGTGACGACTTGTGGGTGGCTCGCTACATTTTGGAGAGGATCACCGAGATTGCTGGGGTGGTGCTTTCTTTTGATCCTCGACCGATTAAGGGTGATTGGAATTGTGCTGGTGCTCACACGAATTTCAGTACCAAGTCCATGAGAAATGATGGTGGCTATGAAGTCATCAAAAAAGCAATCACAAAGTTGGAAAAGAGGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAATGAACGCCGTTTGACAGGAAAACATGAGACAGCTGACATTAACACCTTCATATGGGGTGTTGCAAACCGTGGTGCTTCTATAAGGGTAGGGAGGGACACAGAGAAGGCAGGGAAGGGATACTTTGAGGATAGAAGGCCTGCATCTAACATGGATCCTTATGTCGTCACTTCCATGATTGCTGAGACAACCCTTCTTTGGAAACCATGA 1071 0.4613 MSLLSDLINLNLSNTTEKVIAEYIWVGGSGMDMRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGADSEVLLYPQAIFKDPFRRGKNILVMCDTYTAAGEPIPTNKRYNAAKIFNHPDVLAEEPWYGIEQEYTLLQKDVKWPLGWPIGGFPGPQGPYYCGIGADKAFGRDIVNSHFEACLYAGINITGINGEVMPAQWEFQIGPSAGISACDDLWVARYILERITEIAGVVLSFDPRPIKGDWNCAGAHTNFSTKSMRNDGGYEVIKKAITKLEKRHKEHIAAYGEGNERRLTGKHETADINTFIWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2456 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Pvu8g2456 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
Pvu8g2456 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 356 - -
Pvu8g2456 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 16 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Pvu8g2456 356 Pfam Glutamine synthetase, beta-Grasp domain 21 96 IPR008147 GO:0004356|GO:0006542|GO:0006807
Pvu8g2456 356 Pfam Glutamine synthetase, catalytic domain 168 347 IPR008146 GO:0004356|GO:0006807
Pvu8g2456 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Pvu8g2456 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Pvu8g2456 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Pvu8g2456 356 SUPERFAMILY Glutamine synthetase/guanido kinase 103 353 IPR014746 GO:0003824
Pvu8g2456 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Pvu8g2456 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2456 Pvu-Chr8 55150074 55154418 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2456 K01915 - gmx:547798 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2373 1 49041375 49045251 Pvu8g2456 8 55150074 55154418 PCT