Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2381 ATGGAGGACTCTTCTTACACCGGTCTTCCCACTAGCCACTTGCTCGGTTCAGTTCCTGCTGTGATTACTGAAGAAAATAATACCACGAAACATGTGGCCACTGATGCGAGTGTGCATGTATTCCCTCCCAACAATGGGGACAGAGGAACTGGATATCAAACTGTTGGCAGGCCTACTGAATCTTTTGAACAACAGCCAGCAAACAACTGGAGGGGAGTCTTTAGCATCTCATCTTATTCACAGTATTTTGATGTAGATACGGATGTTGTCCTAATCAGACTGATAAGTTCTTTGAATCCAGTTGCGGGAGACTTTTTCAGCAAGATAGATGCTAATCCTGATTTATATGGGCTTATATGGATCTCAACAACATTGGTGTTTGTGCTTGCTGCGCTTGGAAATCTGGCCACGTTCCTTATGCAAAAACATGCTGATAACAGTACCTCGTGGAGCTTTGATGTCAGCTACATGAACGTGGCTGCATGCTCAATCTATGGTTATGCAATTGTTGTCCCATTGGCATACTACTTCTTCCTTCAGTATATGGGTTCAAATGCCAGCCTTATAAGATTTTGGTGCATGTGGGGTTATTCTCTCACCATTTTCATCATGTCTTCGTTCCTGTTGATAATTCCTGTTGAGTTTCTTCGGTGGGTTATAATACTCCTTACGGGTGTTGCCTCAGCAAGCTTTGTTGCTTTAAACCTGAGGTCTTACATAGAAGGCAATGAGCTTTCGGTGGCGATTATTGCAGCATTTTTCTTGCAAATAGCTTTGGCAATCTTCATCAAGGTTTGGTTCTTTCCGTAG 810 0.4296 MEDSSYTGLPTSHLLGSVPAVITEENNTTKHVATDASVHVFPPNNGDRGTGYQTVGRPTESFEQQPANNWRGVFSISSYSQYFDVDTDVVLIRLISSLNPVAGDFFSKIDANPDLYGLIWISTTLVFVLAALGNLATFLMQKHADNSTSWSFDVSYMNVAACSIYGYAIVVPLAYYFFLQYMGSNASLIRFWCMWGYSLTIFIMSSFLLIIPVEFLRWVIILLTGVASASFVALNLRSYIEGNELSVAIIAAFFLQIALAIFIKVWFFP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2381 269 Pfam Yip1 domain 99 263 IPR006977 GO:0016020
Pvu8g2381 269 PANTHER PROTEIN YIPF 1 269 - -
Pvu8g2381 269 PANTHER UNCHARACTERIZED 1 269 IPR039765 GO:0005794|GO:0016192|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2381 Pvu-Chr8 54496957 54501073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2381 K22940 - gmx:100813483 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2381 8 54496957 54501073 Pvu8g2381 8 54496957 54501073 ECH
Pvu1g2450 1 49727457 49730679 Pvu8g2381 8 54496957 54501073 PCT