Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2216 ATGGATCCTGGAAATTTTGAAAATTCTGAAAGTTTTGAAAATTCTGAGGAGGATTTGACGAACTATTCATCAGATAAATTGAGTGACTGTGTGGCAGAGTTCACATTGGAAGGGAAATGGGATAAGGTTGTGGACATGTACAAGCGTGTCCCAGAGTGTCACACGGCAATGATTAACGAATCCGTGGGCACTGCACTGCACGTGGCCGTGGATTTAGACGAAGAAGCTGTGGTTTATGACCTTGTGAATGAAATTACCAGAGACAGACATGAAGAGAAGATCAAGGCACTGGAAACGGTGAACGATCGAGGGGATACTCCTCTGCATGTAGCGGCTTCGAGGGGTTTCACAAAGATATGTAGGTGGATCATAGGAACGAAGGAGGAGAGGATTTACTTGGTGAGTCGAAAGAACAAAAATGGAGAGACACCTCTCTTTGGAGCTGCCATCAACTGGAAGAAACAAGCCTTTGCTTATCTTTCTAACGTTTCCGGCCACAGCGCTCCCTTGCAAGATCTTGTGCGTCACAATGGTGACACTATTCTTCACTGTGCTATCGAGAGAGAGTACTTTGATTTGGCTGTCATAATAGTGCATTATTATGATTTCCTTAGCACACATAAGAATAAAGAGGGATTAACCCCTCTCACAGTCCTTGCTACTAGGCCCTCGGCCTTCAGAAGTGCTACCAAACTTTCATGGTGGAAGCGAATCCTCTACCACTGTATGCTTGTGGAACAAGTGGACCCTGAAAAACAAATGAAGAAAATTTTGGAAAAGATGAAGAAGCAACCAGAATCTGAGGAACTGAATTATCCAAAGAACTATGTCACATTATGTGACTTCTTTGCTATATTCAGAGGTCTTGCTGCTCCAATTGAAAAACCATCAAAGAAGAAGCGTAAAATCGTATTTAAAGCTGCCGAGGTTGGATATTTTCCACCAAATTATGAAACCAGTCAACACTTTTTAAGGTCTGCATATGTACATACTCTTGGGCTCTCAGGAGTAGCATTAAAGGAAATAAGGAACACGAAGAAGAGGCATGAATGGAGTGGTCAACTCTTGAAGGCACTATTGAAAAGACCTTATGCAGCATTCACAGGAAGTGGGGGTGTCCCAACTGATATTCAAGTTGAAGCAGATATGTATAATGTTTATAACCAGTATAAACAAGGTGAAGCTAGTGCAGCTAATGAATTGAGATGGTTGGAAAAGGAAGAAAAAGAAATACAGGCTATAGACAAAAGATCTTTAAGCCCAAGTGACACAATTAAGAAAGAAAGTGATAAAGTGGCTGAGAAGAAAATTGACAAAACGGAGACAGCATTTCTGGTTGCAGCAAGAAATGGCATAGTTGAAATGGTGAATGAAATTTTAAACCGAATTCCAAGTGTCATCCATAACACTAATTCACATAAAGAGAATGTGTTGCTGGTGGCAGTGATGAACAGGCAACCCTTTGTTGTTGAGAATTTGAAAATGAAGATGCAGTCAAAACCAGAAGTTTGGAATAATTTAGCTCTGACAGTAGATGAAAATGAGAACACCATATTGCACTGGGCAGCATATGCTCCAGGGGGCGACAAGTCTCCACAGATAGCTGGTTCTGCCTTGCAAATGATGTGGGATATAAAGTGGTTTCAGTATATTAAAAGCCTTGTGCCACAACACTTTTACTTTAGAAGCGACAATCGGGGGAAAACTGCAGGGCAAATATTCGAGGAAACACATAAAAGCCTGATACATGAAAGTGGCAATTGGCTGAAGGAAACATCTGAATCTTGTTCTGTTGTGGCTGCACTTGTTGCTGGTGTTTCCTTTGCTACTGCCAGCGCCATCCCCGGTGGCACCGATGAACAAGGTAGGCCTCGTTTAGAAGGCAAGCCTGCATTCGATATATTTGCCGTTGCTTCACTTGTTGGACTTTGCTTCTCTGTCACTGGACTCATAATGTTCCTTACCATTCTCACTTCTCGAAAGCAATCCAAAGATTTTCGCAGATCTTTGCCATTCAAAGTTCTTCTAGGCCTGAGTTCTCTCTTTGTATCCATTGCTGCAATGTTTGTCTCTTTCTGCTCCGGTCATTATTTTCTGCTTAGTCACAGATTCAAGATGGTTCTATACCCCATTTATGCAGCCACTGTTTTACCAGTCATTTTCTATGCTGTGGCACAGTTTCCACTATACTTTGATCTTATCACGGCCATTCTAGCTACGGTGCCATGGACAGCTGATAAAGGAGCCAAGTTATAG 2256 0.4202 MDPGNFENSESFENSEEDLTNYSSDKLSDCVAEFTLEGKWDKVVDMYKRVPECHTAMINESVGTALHVAVDLDEEAVVYDLVNEITRDRHEEKIKALETVNDRGDTPLHVAASRGFTKICRWIIGTKEERIYLVSRKNKNGETPLFGAAINWKKQAFAYLSNVSGHSAPLQDLVRHNGDTILHCAIEREYFDLAVIIVHYYDFLSTHKNKEGLTPLTVLATRPSAFRSATKLSWWKRILYHCMLVEQVDPEKQMKKILEKMKKQPESEELNYPKNYVTLCDFFAIFRGLAAPIEKPSKKKRKIVFKAAEVGYFPPNYETSQHFLRSAYVHTLGLSGVALKEIRNTKKRHEWSGQLLKALLKRPYAAFTGSGGVPTDIQVEADMYNVYNQYKQGEASAANELRWLEKEEKEIQAIDKRSLSPSDTIKKESDKVAEKKIDKTETAFLVAARNGIVEMVNEILNRIPSVIHNTNSHKENVLLVAVMNRQPFVVENLKMKMQSKPEVWNNLALTVDENENTILHWAAYAPGGDKSPQIAGSALQMMWDIKWFQYIKSLVPQHFYFRSDNRGKTAGQIFEETHKSLIHESGNWLKETSESCSVVAALVAGVSFATASAIPGGTDEQGRPRLEGKPAFDIFAVASLVGLCFSVTGLIMFLTILTSRKQSKDFRRSLPFKVLLGLSSLFVSIAAMFVSFCSGHYFLLSHRFKMVLYPIYAATVLPVIFYAVAQFPLYFDLITAILATVPWTADKGAKL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2216 751 PANTHER CASKIN 42 748 - -
Pvu8g2216 751 SUPERFAMILY Ankyrin repeat 441 524 IPR036770 -
Pvu8g2216 751 MobiDBLite consensus disorder prediction 1 20 - -
Pvu8g2216 751 SUPERFAMILY Ankyrin repeat 40 220 IPR036770 -
Pvu8g2216 751 Pfam Domain of unknown function 587 698 IPR026961 -
Pvu8g2216 751 Gene3D - 378 586 IPR036770 -
Pvu8g2216 751 PANTHER ANKYRIN REPEAT PROTEIN 42 748 - -
Pvu8g2216 751 SMART ANK_2a 177 208 IPR002110 GO:0005515
Pvu8g2216 751 SMART ANK_2a 439 469 IPR002110 GO:0005515
Pvu8g2216 751 SMART ANK_2a 473 503 IPR002110 GO:0005515
Pvu8g2216 751 SMART ANK_2a 514 547 IPR002110 GO:0005515
Pvu8g2216 751 SMART ANK_2a 103 133 IPR002110 GO:0005515
Pvu8g2216 751 Gene3D - 28 259 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2216 Pvu-Chr8 52563365 52568635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2216 443 703 Miscellaneous Gene Families AT3G09550 22.654 4.49e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2216 - - pvu:PHAVU_008G214100g 1488.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2216 8 52563365 52568635 Pvu8g2216 8 52563365 52568635 ECH