Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2215 ATGGATCCTGGAAATTTTGAGGAGGAGTTGTCTTACAATTCATCAGATGAAGTGAGTGATCAGCTGGCGGAGTACACATTGGAAGGGAAATGGCAGAAGGTTGTGAAGATGTACAACAAAGTCCCAGCATGTCACACGGCAATGATTAACGGTTCCGTGGGCACTGCATTGCACGTGGCCGTGGATTTGGACGAAGAAGATGTGGTTTATGACCTTGTGAATGCAGTTATCGGACACAGACATGAAGTGAAGATCAAGGCACTGGAAATGGTGAACGATCGAGGGGATACTCCTCTGCATGTTGCGGCTTCGAGGGGTTTCGCAAAGATATGTAGGTGGATCATAGGAACGAAGAACGAGAGGATTTACTTGGTGAGTCGAAAGAACAAACATGGAGAGACACCTCTCTTTGGAGCTGCCATCAACTGGAAGAAACAAGCCTTTGCTTATCTTTCTAAAGTTTCCGGCCACAGCGCTCCCTTGCAAGATCTTGTGCGACACAATGGTGACACTATTCTTCACTGTGCTATCAGGAGAGAGTATTTCGATTTGGCAGTGATAATAGTGCATTACTATGATTTCCTTAGCACACATAAGAATAAAGAGGGATTCACTCCTCTCAAACTCCTTGCAACCAGGCCGTCGGCTTTCAAAAGTGCTACCAAACTTTCATGGTGGAAGCGAATCCTGTACCACTGTATACTTGTAGAGCCACTGGATCCTGTGAAACAAATGAACGCGAATCTGGGAAAGATATTGGACAATCCCAAGTCTGATAAAGTGGATTATCCAAAGAACTATGCCACACTATATGATTTCTTTGCTCGATCGTTTAGTGTTATTGCTCTATTTGGAAAAATGCCCTCGACAAAGAATCAGCATGACTCAGAAAACCCGTCATTTAAAAAGTGTACCATTGAATTGGGAACTCCCCGGGTTGGACTTTTTCCTCCAAATTATGAAACCTCTCAACAATTTATTAGGTCTGCATATGTACATACTCTTGGCCTCTCAGGAGTGGGAAGTGGAGGTGTCCCAACCGATATGAAAGTTGAAACAGATATGTATAATGTTTATAGCCAATATAAACAAGGTGAAACCAGTGAGTTAGGATGGTTGGAAGGAGAAAATAAAACAGATGTTGATGACAAAAAGACTGTAGAACGAAGTCAGACCATGAAGAAGGAATCCGATCAACTAGCTGAAGAAGAAAAAATTGACAAAAAGGAGACAGCCTTTTTGGTTGCAGCAAGAAATGGCATAGTTGAAATGGTGAATGAAATGTTATATCGAATTCCAAGTGTCATCCATAACACTAACTCAAAGAAAGAAAATGTGTTGCTTGTGGCTGTGCTGAATAGGCAACCCCTTGTTGTTCAGTGTTTGAAAACGAAGATGCAGTCAAAACCAGAAGTTTGGAATAACTTAATTCTGACAGTAGATGAAGATGAGAGCACCATGTTACACTTGGCAGCATATGCTCCTGGCGGCGATAAACCTTGGCAGATAGCTGGTTCTGCCTTACAAATGGTGTGGGATATAAAGTGGTTTCAGTATATTAAAGGCCTTGTGCCACAACACTTTTCCTTTAGAAGTGACAAGAAGGGGAAAACCGCAGGGGACATCTTCGAGGAAACACATAAAGAACTGATAGAGGAAAGTGGAGAGTGGCTGAAGGATACGTCTGAATCTTGTTCTGTTGTGGCTGCACTTGTTGCTGGTGTTTCCTTCACTGCAGCCAACAGCATCCCTGGTGGCACCGACGACCAAGGTAGGCCTAATTTAGAAGGCAAGCCTGCATTCGATGTATTTGCCATTGCTTCGCTTGTTGGACTTTGTTTTTCCGTCACTGGTCTCATAATGTTCCTTACCATCCTCACTTCTCGAAAGCAAGCCAAAGATTTTCGCAGAGATTTGCCACTCAAACTTCTTCTTGGCTTGAGTTCTCTTTTCGTATCCATTGCTGCAATGATTGTTTCTTTCTGCACCGGCCATTTTTTTCTGCTTAGTCACGGATACAAGACGGTCCTATACCCCATTTATGCAGCCACTTTTTTTCCTGTCACATTCTATGCTGTGGCACAGTTTCCTCTATACTTTGATCTTCTAACAGCCATTTTAACTACGGTTCCACAATCAAGTGATAAAGGAGATAAGTTGTAG 2163 0.4286 MDPGNFEEELSYNSSDEVSDQLAEYTLEGKWQKVVKMYNKVPACHTAMINGSVGTALHVAVDLDEEDVVYDLVNAVIGHRHEVKIKALEMVNDRGDTPLHVAASRGFAKICRWIIGTKNERIYLVSRKNKHGETPLFGAAINWKKQAFAYLSKVSGHSAPLQDLVRHNGDTILHCAIRREYFDLAVIIVHYYDFLSTHKNKEGFTPLKLLATRPSAFKSATKLSWWKRILYHCILVEPLDPVKQMNANLGKILDNPKSDKVDYPKNYATLYDFFARSFSVIALFGKMPSTKNQHDSENPSFKKCTIELGTPRVGLFPPNYETSQQFIRSAYVHTLGLSGVGSGGVPTDMKVETDMYNVYSQYKQGETSELGWLEGENKTDVDDKKTVERSQTMKKESDQLAEEEKIDKKETAFLVAARNGIVEMVNEMLYRIPSVIHNTNSKKENVLLVAVLNRQPLVVQCLKTKMQSKPEVWNNLILTVDEDESTMLHLAAYAPGGDKPWQIAGSALQMVWDIKWFQYIKGLVPQHFSFRSDKKGKTAGDIFEETHKELIEESGEWLKDTSESCSVVAALVAGVSFTAANSIPGGTDDQGRPNLEGKPAFDVFAIASLVGLCFSVTGLIMFLTILTSRKQAKDFRRDLPLKLLLGLSSLFVSIAAMIVSFCTGHFFLLSHGYKTVLYPIYAATFFPVTFYAVAQFPLYFDLLTAILTTVPQSSDKGDKL* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2215 720 Gene3D - 382 503 IPR036770 -
Pvu8g2215 720 Gene3D - 13 230 IPR036770 -
Pvu8g2215 720 SUPERFAMILY Ankyrin repeat 55 215 IPR036770 -
Pvu8g2215 720 SMART ANK_2a 442 472 IPR002110 GO:0005515
Pvu8g2215 720 SMART ANK_2a 408 438 IPR002110 GO:0005515
Pvu8g2215 720 SMART ANK_2a 168 199 IPR002110 GO:0005515
Pvu8g2215 720 SMART ANK_2a 94 124 IPR002110 GO:0005515
Pvu8g2215 720 PANTHER ANKYRIN REPEAT PROTEIN 33 340 - -
Pvu8g2215 720 PANTHER ANKYRIN REPEAT PROTEIN 343 719 - -
Pvu8g2215 720 Pfam Domain of unknown function 556 667 IPR026961 -
Pvu8g2215 720 PANTHER CASKIN 343 719 - -
Pvu8g2215 720 PANTHER CASKIN 33 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2215 Pvu-Chr8 52556717 52561000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2215 387 661 Miscellaneous Gene Families AT3G12360 25.000 4.89e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2215 - - gmx:100799438 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2215 8 52556717 52561000 Pvu8g2215 8 52556717 52561000 ECH