Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g2212 ATGGAGAACTTCCCCGTGATCAACTTGGCGAATCTCAATGGTGAGGAGAAGAAGGCTACCCTAGAGCAGATTGAAGATGCTTGCAAAAACTGGGGATTTTTTGAGTTGGTGAATCACGGAATATCCCAGGAACTTCTGGACAGGGTGGAAAGGCTAACAAAAGAGCATTATAGGAAATGCATGGAGAAGAGGTTCAACGAGGCAGTGAGAAGTAAGGGATTAGAGTGTGTCCAAGATGAACTCAAGGACATGGACTGGGAGAGCACCTTCTTCTTGCGCCATCTCCCAACTTCCAACATCTCTGAAATTCCTGATCTCACCCAAGATTACAGGGATGCAATGAAGGAGTTTGCAGAGAAATTGGAGAAACTAGCAGAGGAGTTGCTAGAGGTGCTGTGTGAAAATCTTGGATTGGAGAAAGGGTACTTGAAGAAGGCGTTCTATGGATCGAGAGGTCCTAATTTTGGGACAAAGGTGGCAAACTACCCTGCATGCCCAAAGCCAGAAATGGTGAAGGGTCTTCGTGCCCATACAGATGCGGGTGGGATAATCCTTCTCTTGCAAGACGACAAGGTGAGTGGGCTTCAGCTTCTGAAAGATGACCAATGGGTGGATGTTCCTCCGATGCGCCATTCCATTGTTGTTAACCTTGGTGACCAAATTGAGGTAATAAGCAATGGGAAATACAAGAGTGTGGAGCATCGTGTGAATGCTCGAAGTGATGGGACGAGAATGTCGGTGGCCTCATTCTACAACCCTGGCAGTGATGCTCTTATCTACCCTGCACCACCATTGTTGGAGAGAGACCCTTTGTACCCAACATTTGTATTTGAGGATTACATGAAGCTCTATGCTACGGTCAAATTCCAACCAAAGGAACCAAGATTTCAAGCCATCAAGGCTCTCAACTCTTCGTAG 918 0.4662 MENFPVINLANLNGEEKKATLEQIEDACKNWGFFELVNHGISQELLDRVERLTKEHYRKCMEKRFNEAVRSKGLECVQDELKDMDWESTFFLRHLPTSNISEIPDLTQDYRDAMKEFAEKLEKLAEELLEVLCENLGLEKGYLKKAFYGSRGPNFGTKVANYPACPKPEMVKGLRAHTDAGGIILLLQDDKVSGLQLLKDDQWVDVPPMRHSIVVNLGDQIEVISNGKYKSVEHRVNARSDGTRMSVASFYNPGSDALIYPAPPLLERDPLYPTFVFEDYMKLYATVKFQPKEPRFQAIKALNSS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g2212 305 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 3 299 - -
Pvu8g2212 305 Coils Coil 107 134 - -
Pvu8g2212 305 SUPERFAMILY Clavaminate synthase-like 3 299 - -
Pvu8g2212 305 Pfam 2OG-Fe(II) oxygenase superfamily 159 253 IPR044861 -
Pvu8g2212 305 Gene3D - 1 305 IPR027443 -
Pvu8g2212 305 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 299 - -
Pvu8g2212 305 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 92 IPR026992 -
Pvu8g2212 305 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 153 253 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g2212 Pvu-Chr8 52545471 52546818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g2212 4 252 Glycosyltransferase AT5G59530 32.567 1.34e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g2212 K05933 - gmx:100815336 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g2212 8 52545471 52546818 Pvu1g2574 1 50720984 50723581 PCT