Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1919 ATGGCCGTTTCAACCAGTTTCTCCGGTGTAAAGTTGGAGGCTTTGTTGCTCAAATGTGCTTCCTCCAATGCCACCACCACCCATTTTTCACTTCTTGGCAGAAACAGAAAGACACTTGTTCAGACTCATAGAGGGGCCATTCGGTGTGAGGTTTCTGCTTCTGATGTTTCTGTTGATCCCACCAAGAAACCTTCCACTATCTCTGCACTTGAGCAGCTTAAAACCTCTGCAGCTGATCGGTATACAAAGGAAAAGAGCAGCATTATGGTCATTGGACTGAGTGTGCATACTACACCAGTGGAAATGCGTGAAAAACTTGCTATACCAGAAGCAGAATGGCCTAGAGCCATAGCAGAGCTTTGCAGTCTGAATCATATTGAAGAAGCAGCTGTTCTGAGCACCTGCAACCGAATGGAGATATATGTTGTTGCTCTGTCCAAGCACCGTGGAGTCAAAGAAGTCACCGAATGGATGTCCAAAACAAGTGGGATCCCAGTTGCAGATCTTTGCCAGCATCAGTTTCTGCTTTACAACAAAGATGCCACACAGCACATTTTTGAAGTATCTGCAGGTCTTGATTCGCTTGTGTTGGGAGAAGGTCAAATTCTTGCCCAGGTGAAGCAAGTTGTCAAGGTTGGACAGGGAGTGAATGGCTTTGGGAGGAACATTAGTGGGCTATTCAAGCATGCAATCACTGTAGGGAAGAGGGTTAGAACTGAGACAAACATTGCTGCTGGTGCAGTTTCTGTCAGCTCAGCAGCTGTTGAACTCGCCTTGATGAAGCTACCTGAAGCCTCTCATGCAAATGCAAGGATGTTGATCATTGGAGCAGGGAAAATGGGAAAGCTTGTGATCAAGCATTTGGTGGCAAAAGGGTGCACAAAGATGGTAGTTGTCAATAGAAGTGAGGAGAGAGTTACGGCAATCCGAGAAGAACTTAAGGATGTTGAGATAATCTACAAACCACTCTCTGAAATGATGACATGCATTGGTGAGGCAGATGTAGCTTTCACCAGCACAGCATCAGAGAATCCATTGTTCTTGAAGGATGATGTTAAGGACCTTCCTCCTGCCACTGATGAAGTTGGAGGCCGTCGTTTTTTCATTGATATCTCAGTTCCTAGGAATGTTGGCTCATGTGTCTCAGATCTTGAGTCTGTGAGAGTGTTCAACGTTGATGACCTTAAGGAGGTTGTGGCAGCTAATAAAGAGGATAGGCTAAGAAAAGCCATGGAAGCTCAAGCAATCATTAGTGAAGAATCTAAGCAATTTGAGGCTTGGAGGGACTCACTAGAAACTGTTCCTACCATTAAAAAGTTGAGGGCTTATGCTGAGAGAATAAGGATCGCTGAGCTTGAAAAATGCCTAGGTAAGATGGGTGATGATATCAACAAGAAGACACAAAGAGCAGTGGATGATCTTAGCAGAGGCATAGTGAATAAGATGCTTCATGGGCCAATGCAACACTTGAGGTGTGATGGCAGTGATAGCAGGACTCTCAATGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAACCTTGAGACTGAAGTATCAGTTTTGGAGCAGAAGATTCGAGCCAAGGTGGAGCAAAAGCCATAA 1608 0.4484 MAVSTSFSGVKLEALLLKCASSNATTTHFSLLGRNRKTLVQTHRGAIRCEVSASDVSVDPTKKPSTISALEQLKTSAADRYTKEKSSIMVIGLSVHTTPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSKHRGVKEVTEWMSKTSGIPVADLCQHQFLLYNKDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHANARMLIIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREELKDVEIIYKPLSEMMTCIGEADVAFTSTASENPLFLKDDVKDLPPATDEVGGRRFFIDISVPRNVGSCVSDLESVRVFNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFEAWRDSLETVPTIKKLRAYAERIRIAELEKCLGKMGDDINKKTQRAVDDLSRGIVNKMLHGPMQHLRCDGSDSRTLNETLENMHALNRMFNLETEVSVLEQKIRAKVEQKP* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1919 535 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 91 241 IPR015895 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 Coils Coil 299 319 - -
Pvu8g1919 535 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 534 - -
Pvu8g1919 535 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 410 516 IPR036453 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 412 516 IPR015896 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 CDD NAD_bind_Glutamyl_tRNA_reduct 88 410 - -
Pvu8g1919 535 PANTHER GLUTAMYL-TRNA REDUCTASE 1 534 - -
Pvu8g1919 535 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 87 243 IPR036343 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 Pfam Shikimate / quinate 5-dehydrogenase 256 398 IPR006151 -
Pvu8g1919 535 ProSitePatterns Glutamyl-tRNA reductase signature. 184 207 IPR018214 GO:0008883
Pvu8g1919 535 Gene3D - 86 246 IPR036343 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 Gene3D - 247 399 - -
Pvu8g1919 535 TIGRFAM hemA: glutamyl-tRNA reductase 88 497 IPR000343 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 Hamap Glutamyl-tRNA reductase [hemA]. 87 514 IPR000343 GO:0008883|GO:0033014|GO:0050661
Pvu8g1919 535 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 246 406 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1919 Pvu-Chr8 48784310 48787819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1919 K02492 - gmx:100815985 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1919 8 48784310 48787819 Pvu8g1919 8 48784310 48787819 ECH