Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1888 ATGGCTTCGAAATACGAGCTGGTGCGCACCGTTTTGGGCGTTTCGGTTTCGGATTCGGTACTGCTGATTGTCACCACCTCCGCCGCCGTGCTGATTGGCCTTCTGGTGTTCGTGTTGAAGAAATCTTCGGATCGGAGCAAGGAACAGAAGTCGCTCGCAGTGCCGAAGTTGGCCCTGCGGCAAGAAGAGGAAGATGAAGCCGATGTTGGTTTGGGGAAGACCAGGGTTGTGGTTTTCTTTGGAACTCAAACCGGTACCGCTGAGGGATTTGCCAAGGCTTTGGCAGAGGAAATCAAGGCTAGGTATGAGAAAGCAGCTGTGAAAGTTGTTGACCTGGATGACTATGCAATGGATGATGATCAATATGAAGAGAAGCTGAAGAAAGAGTCACTTGCATTTTTCATGTTGGCAACGTATGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTGCAAATGGTTTAGTGAGGGTAAAGATGAGAGGGGTACCTGGCTTCAACAACTCAAATATGGTGTTTTTGGCTTAGGTAACCGGCAATATGAACATTTTAACAAGATAGGTGAAGTAGTTGATCAAGAACTTAGTGAACAAGGTGCAAAGCGTCTTGTTCCACTAGGGCTAGGGGATGATGATCAATCCATTGAGGATGATTTTGTTGCCTGGAAGGAATCTCTATGGCCAGAGTTAGATGAGTTGCTCCGAGATGAGGATGATGTAAATACTGTCTCTACTCCTTATAAGGCTGCTATTCCTGAATATCGAGTGGTTATTCATGATTCAACTGTCACATCTTGCAATGATAATCGCATAAATGTGGCAAATGGGAATACTGTATTTGATATGCACCATCCTTGCAGGGTTAATGTTGCAGTTCAAAGAGAACTTCACAAACCTGACTCTGACCGATCTTGCATACATTTGGAGTTTGACATATCAGGGACTGGCATAATATATGAAACCGGTGACCATGTGGGTGTTTTTGCTGAAAACTGTGATGAAACTGTTGAAGAAGCTGGAAAGCTGCTGGGTCAGAATTTAGATTTGTTGTTTTCCCTTCACACTGATAATGAGGATGGTACTCCCTTGGGAGGATCTCTACCACCTCCTCTTCCTGGCCCTTGCACACTGCGCTATGCTTTAGCTCATCATGCAGATCTCTTGAACCCCCCACGCAAGGCTGCTTTAGTGGCTCTGGCTGCACACACTTCGGAACCCAGTGAAGCAGATAGATTAAATTTCCTCTCATCTCCTCAGGGAAAGGATGAGTACTCCAAATGGGTGGTTGGAAGTCAGAGAAGTCTCCTTGAGGTTATGGCTGAGTTCCCGTCAGCCAAGCCACCCCTTGGTGTTTTTTTCGCTGCAGTAGCCCCTCACTTACAACCTCGTTATTATTCTATTTCATCCTCACCTAGATTTTCCCCTCAAAGGGTACATGTAACTTGTGCATTGGTATGTGGTCCAACTCCTACTGGAAGAATTCACAAAGGAGTATGTTCAACCTGGATGAAGAGCGCTATTCCCTTGGAGAAAAGTCATGAGTGTAGTTGGGCTCCTATTTTTATCAGAACATCAAACTTCAAGTTACCGGCTGATCATTCCATTCCTATTATTATGGTTGGTCCTGGAACTGGCTTGGCACCTTTCAGGGGATTTTTACAGGAAAGGTTGGATCTCAAAGAGAATGGTATTCAACTTGGATCCGCAGTACTCTTCTTTGGATGTAGGAATCGACAAATGGATTTTATTTATGAGGATGAGCTAAACAAATTTGTGGAACAAGGTGCTCTGTCAGAGTTGATAGTCGCATTCTCGAGAGAGGGACCTGAAAAGGAGTATGTTCAACACAAGATGATTGATAAAGCAGCAAATTTGTGGAATTTGATTTCCCAGGGAGGTTATCTTTATGTCTGTGGCGATGCTAAGGGTATGGCAAGAGATGTTCATCGGACTCTTCATACCATTGTCCAGCAGCAGGAAAAAGTGGACTCTTCAAAAGCAGAGGCTATTGTGAAAAAACTCCAGATGGATGGACGTTATCTTAGAGATGTTTGGTAA 2058 0.4461 MASKYELVRTVLGVSVSDSVLLIVTTSAAVLIGLLVFVLKKSSDRSKEQKSLAVPKLALRQEEEDEADVGLGKTRVVVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDDQYEEKLKKESLAFFMLATYGDGEPTDNAARFCKWFSEGKDERGTWLQQLKYGVFGLGNRQYEHFNKIGEVVDQELSEQGAKRLVPLGLGDDDQSIEDDFVAWKESLWPELDELLRDEDDVNTVSTPYKAAIPEYRVVIHDSTVTSCNDNRINVANGNTVFDMHHPCRVNVAVQRELHKPDSDRSCIHLEFDISGTGIIYETGDHVGVFAENCDETVEEAGKLLGQNLDLLFSLHTDNEDGTPLGGSLPPPLPGPCTLRYALAHHADLLNPPRKAALVALAAHTSEPSEADRLNFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPHLQPRYYSISSSPRFSPQRVHVTCALVCGPTPTGRIHKGVCSTWMKSAIPLEKSHECSWAPIFIRTSNFKLPADHSIPIIMVGPGTGLAPFRGFLQERLDLKENGIQLGSAVLFFGCRNRQMDFIYEDELNKFVEQGALSELIVAFSREGPEKEYVQHKMIDKAANLWNLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQEKVDSSKAEAIVKKLQMDGRYLRDVW* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1888 685 Hamap NADPH--cytochrome P450 reductase [POR]. 15 685 IPR023208 GO:0003958
Pvu8g1888 685 ProSiteProfiles Flavodoxin-like domain profile. 76 227 IPR008254 GO:0010181
Pvu8g1888 685 PIRSF P450R 8 685 IPR023208 GO:0003958
Pvu8g1888 685 Gene3D - 329 461 IPR023173 GO:0016491
Pvu8g1888 685 PRINTS Flavodoxin signature 77 90 IPR001094 GO:0010181
Pvu8g1888 685 PRINTS Flavodoxin signature 133 144 IPR001094 GO:0010181
Pvu8g1888 685 PRINTS Flavodoxin signature 168 178 IPR001094 GO:0010181
Pvu8g1888 685 PRINTS Flavodoxin signature 192 211 IPR001094 GO:0010181
Pvu8g1888 685 SUPERFAMILY Flavoproteins 73 237 IPR029039 -
Pvu8g1888 685 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 526 685 IPR039261 -
Pvu8g1888 685 Pfam Oxidoreductase NAD-binding domain 539 649 IPR001433 GO:0016491
Pvu8g1888 685 Gene3D - 40 245 IPR029039 -
Pvu8g1888 685 Gene3D Translation factors 285 528 - -
Pvu8g1888 685 PANTHER NITRIC OXIDE SYNTHASE-RELATED 10 685 - -
Pvu8g1888 685 Gene3D - 529 685 IPR039261 -
Pvu8g1888 685 PANTHER NADPH--CYTOCHROME P450 REDUCTASE 10 685 - -
Pvu8g1888 685 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 283 530 IPR017927 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 319 329 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 463 470 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 497 506 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 538 557 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 567 576 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 580 591 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 611 627 IPR001709 GO:0016491
Pvu8g1888 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 634 642 IPR001709 GO:0016491
Pvu8g1888 685 Pfam FAD binding domain 280 502 IPR003097 GO:0016491
Pvu8g1888 685 CDD CYPOR 281 685 - -
Pvu8g1888 685 SUPERFAMILY Riboflavin synthase domain-like 273 527 IPR017938 -
Pvu8g1888 685 Pfam Flavodoxin 78 222 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1888 Pvu-Chr8 48102850 48114161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1888 K00327 - gmx:547712 1221.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1888 8 48102850 48114161 Pvu8g1888 8 48102850 48114161 ECH
Pvu8g1888 8 48102850 48114161 Pvu9g0375 9 7661446 7669700 PCT