Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1886 ATGTTGCAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCACATCAGGACAAAGCAGTCAAAATGGCTGGATCAGAGCCTCCATGATATGGAGGAGAAGGTGGCTGAAACCCTCGCTGTGCTGCGAGATGAGGGGGACTCGTTTGCTAAGAGGGCAGAAATGTATTACAAGAAGAGGCCAGAGTTGGTAAATTTTGTGGAAGAAACCTTTCGAGCATATAAAGCCTTAGCAGACAGATATGATCATTTATCAAAGGAACTTCAAAGTGCCAACCGCACTATAGCCAGTGTCTTCCCAGACCAAGTCCCATGTCATATTGAAGAAGATGAAGAAGAAGAAAGTGACACAGGAACTAATACATTATCATCAGACCCCAACAACAATCAAACACATGATAAACCATCCATTCCTAAAGTTCCAAAAACCCCAAAGAAGGAATTTAGAAATCCCTCCATGTTGATCTCCAGAAAGGGCACACTTAAGAGGACTGCTAGCTCTGCAAAATATATTCCAACCATTTCATGTTCAGGTCTGACCAAGGTTGAAGCCTTGGGAGAAATTGACAAGCTTCAGAAAGAAATATTGTCACAGCAAACTGAGAAAGAGTTCGTGAGGAGTTTGTATGAACGCGCCTATGGAAAGTACTGGGAGATTGAAGACCAGATCGCAGCAACACAGAAAAGAGTTTGCAGCTTGCAAGATGAGTTTGGTGTTGGGACAGTGATAGAAGACAATGATGCTAGAGCTTTGATGGCAGCCACGGCTCTGAAATCATGCCAAGAGACCCTGGACAAGTTGAAAGAGATTCAAGCTCAATCATCCAAAGAAGCTAAAGAGGAGTATCAAAGGGTTAAGAAAGCTCACGAGATGTTTGAGACCCTTAGAGACCAATTCATTTCTAAATATATGACGGGTCAACTAGACCATGATGATGGGGAGAAGTGCACGAGTGAAAGAACAGATAGAAAATGCATAGATGAAGAGATGGATCGGTTGGAGCAAGAGGCGAGTGATGTGGGGCAATTGAGAGAGAAGATTAAACGAAAGTTGGAGGAAGATCCAAGGAACTCCTTCACTGTGACTGAAATGGCTGAGTGCATTGATGAGCTTGTAAATAAGGTTTGTACCTTGGAAACCGCGGTTTCATCTCAGACTGGTTTGGTAAAGAGACTAAGATCAGACACAGATGGACTTCAGACAAACATAAGAAAGTTGGAAGAAGACAAGGAAATGCTCATAGAAGGCTCAGAAGCTACGAATAAGAAGCTAAAGGAATTAGAGAGAGAGTTGTGGAGAGTTAAAATGCTCAACCGAAGTGTCCGAAGTCAAGACAACACCCTCCAAACGCACTTTACTGAAGCAAGCTGTAACCTTGAGCACCTTTCTGGAAAATTGATTTACATGAAGCCAGATGAGGAGGAGGAGAACTTGGTACTTTACAGGAAGAACAGAACCGCTTCTGATGGTAAACCAGAGAAACCGTCTGCAAAACATGGTGTTGACTTCTCTGTTGGTAACTCAGATGTCAAGACTATAAACGAAGACGATGGTGCAAATGCTGATAAGAACAAGTATAATTCGGTTGGCAGTAGTTTTGTTAATGAAAGGATTCAGAAGCTGCCACTCCATGAAAATGACTATTTATCAGATACAGTGAGCAATATTGACAATGAATCACAGGATTTGGCCACTAGTGAGGGAGATCAACCTAACTGGAGGCAGATGTTTATGAGTGGATTAGATGACAGAGAAAAGATTCTGCTGGAGGAGTACACATCAGTTTTACTCAACTATAAGGAGCTCAGGGGGAAGCTCAATGAGGTGGAAAAGAAAAACCGTGACAGCATTTTTGAGTTGACACTTCAGCTAAGGGAGATGAAGAATGCTCTTATCGCAAAGGATAAAGAGATACAGTCTTTACATCAGAAGCTAAACTTTCCAGATACAAATCCTGATGAAAGTCCCTACAGTAACACCACAGAATACAAATATACACCCAATGAAGCACTATTTCGAAAAGTAAGTCAAAGAGCATATGGGTCAGACTCAGAAGTTCTACGTTTAAATACAGATCCAAATGCAGTCACAACCCCTTTCTCAGAATATCAGGGTGAAACTGAAAGCACGAGAAATATGTACGTATCATCTTTGAAAATGACACTTCAGAAGCTCATGGAACATCAGGATAAGCGCCATGACCTTTCAAACTTGGAACAGAAATTCCGTTCGGACATCGACGACTTAATGGAAGAGAACTTGGAGTTCTGGTTGAGGTTTAGCACTTCAGTTCATCAGATTCAAAAGTTCCAAAACTCTATTCAGGACTTAAAAGCTGAGTTGAAAACAATAAGGGAAAGAAACAACAAGTCTGAAGGGTATTCACATCATAAACAACAGCCTATACAATCTGAACTCAGGCCAATATTCAGACACCTTAGAGAAATAAGAACTGAGTTATCACTGTGGGTGGAACACAATGCAGTGCTTCAGGATGAACTGCAAGGAAGGTACTCATCTTTGAGCAACATCCAAGATGAGATAGCAAGAGCGGGGAACGCCGAATCCGGCGCCGACCAGGCTGAGCTAATTAGCAAGTACCAAGGTGCAAAGTTTCAAGGTGAGATTCTGAACATGAAGCAAGAGAACAGCAAGGTTGCAAGTGAACTACAAGCCGGTCTTAGCCTAGTGAAGGGGATGAAAGTTGATGTTGAGAAGACCCTTGATGAGCTAGATGAAGCTATTGGTGTTAATACTAGTCCTGATAAGAATGCCAGCGAGATGAAAAAATCCACTACTCGTGCTCGAATACCCTTGAGGTCTTTCTTGTTTGGAGTCAAGTTAAAGAACAAAAAGAATCATCCTTCACTGTTTGCATGTGTCAACCCAGCATTGCAAAGACAACACAGTTTCAATGAAGCACCAGCTCCATTGTAG 2943 0.4224 MLQRAASNAYSWWWASHIRTKQSKWLDQSLHDMEEKVAETLAVLRDEGDSFAKRAEMYYKKRPELVNFVEETFRAYKALADRYDHLSKELQSANRTIASVFPDQVPCHIEEDEEEESDTGTNTLSSDPNNNQTHDKPSIPKVPKTPKKEFRNPSMLISRKGTLKRTASSAKYIPTISCSGLTKVEALGEIDKLQKEILSQQTEKEFVRSLYERAYGKYWEIEDQIAATQKRVCSLQDEFGVGTVIEDNDARALMAATALKSCQETLDKLKEIQAQSSKEAKEEYQRVKKAHEMFETLRDQFISKYMTGQLDHDDGEKCTSERTDRKCIDEEMDRLEQEASDVGQLREKIKRKLEEDPRNSFTVTEMAECIDELVNKVCTLETAVSSQTGLVKRLRSDTDGLQTNIRKLEEDKEMLIEGSEATNKKLKELERELWRVKMLNRSVRSQDNTLQTHFTEASCNLEHLSGKLIYMKPDEEEENLVLYRKNRTASDGKPEKPSAKHGVDFSVGNSDVKTINEDDGANADKNKYNSVGSSFVNERIQKLPLHENDYLSDTVSNIDNESQDLATSEGDQPNWRQMFMSGLDDREKILLEEYTSVLLNYKELRGKLNEVEKKNRDSIFELTLQLREMKNALIAKDKEIQSLHQKLNFPDTNPDESPYSNTTEYKYTPNEALFRKVSQRAYGSDSEVLRLNTDPNAVTTPFSEYQGETESTRNMYVSSLKMTLQKLMEHQDKRHDLSNLEQKFRSDIDDLMEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIRERNNKSEGYSHHKQQPIQSELRPIFRHLREIRTELSLWVEHNAVLQDELQGRYSSLSNIQDEIARAGNAESGADQAELISKYQGAKFQGEILNMKQENSKVASELQAGLSLVKGMKVDVEKTLDELDEAIGVNTSPDKNASEMKKSTTRARIPLRSFLFGVKLKNKKNHPSLFACVNPALQRQHSFNEAPAPL* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1886 980 Coils Coil 318 355 - -
Pvu8g1886 980 PANTHER PROTEIN NETWORKED 2A 1 972 - -
Pvu8g1886 980 MobiDBLite consensus disorder prediction 487 526 - -
Pvu8g1886 980 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Pvu8g1886 980 MobiDBLite consensus disorder prediction 111 154 - -
Pvu8g1886 980 Coils Coil 76 96 - -
Pvu8g1886 980 MobiDBLite consensus disorder prediction 121 138 - -
Pvu8g1886 980 Coils Coil 183 203 - -
Pvu8g1886 980 Coils Coil 626 646 - -
Pvu8g1886 980 Coils Coil 391 432 - -
Pvu8g1886 980 Coils Coil 594 614 - -
Pvu8g1886 980 PANTHER PROTEIN NETWORKED 2D 1 972 - -
Pvu8g1886 980 Coils Coil 769 796 - -
Pvu8g1886 980 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1886 Pvu-Chr8 48076781 48080456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1886 - - gmx:100784970 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1886 8 48076781 48080456 Pvu8g1886 8 48076781 48080456 ECH
Pvu8g1886 8 48076781 48080456 Pvu9g0378 9 7684183 7688513 PCT