Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1855 ATGAGAGAGAACCATCCTTCCACAAACTCCGATGACGACCAGCGATCCTCCCTGCTGGATCTGGCGCGCGCCGAAATCTCCTCCAACTCCAAGACCCGAAACTACGGCGGGTTCCCGGATCCGGGTTCCGGGTCGGGTCCATCGGAGCCTCAGGCTCCGTTCCCGGACCAGGTCCTCGAGAACGTGCTGGAGAACGTGCTCCACTTCCTCTCCTCGCGCCACGACCGCAACGCCGCCTCATTGGTGTGCCGCTCCTGGTACCGCGCGGAGGCCCTCACCCGATCCGAGCTCTTCATCGGGAACTGCTACGCGCTCTCTCCGGCCCGCGCCACCACGCGTTTCACGCGCGTCAAGTCCGTCACCGTCAAGGGCAAGCCGCGCTTCGCGGACTTCGATCTGATGCCCCCCGATTGGGGGGCCAACTTCGCGCCTTGGGCCTCCGCCCTGGCCCAGGCCTACCCCTGGCTCGAGAAGCTCCATCTCAAACGCATGAACGTCTCCGACGCCGACCTCGCCCTCCTCGCCGACTCCTTCTCCACCTTCCGCGAACTCGTCCTCGTCTGCTGCGAGGGCTTCGGCACTCCCGGCCTCGCCAACGTTGCTGCCAAGTGCAGACTGCTGAGGGTGCTTGAGCTGGTGGAATCTGTAGTGGAGGCTGAGGACGATGAGGAAATAGATTGGATTTCTTGTTTTCCCGAGAGCCAAACCAACATGGAGTCTCTTGTGTTTGATTGTGTTGAGTGTCCTATTAATTTCGAGGCTTTGGAGAGTTTAGTGGCTAGGTCGCCTCGTTTGAAGAAGCTTCGGTTGAACCAATTTGTTTCCATGGCTCAGCTCCATCGTTTGCTGCTACGAGCCCCGCAGCTTACTCACCTGGGAACAGGCTCCTTCAGTGCTACTGAGCCCGGGGTGGTCGGCGAACTGGAACCGGATTACACGGCAACGTTTGAGGCCTGCAGATCCTTGGTTTGCCTGTCTGGATTCAGGGAGATTTGGGCGGACTACCTTCCCGCGATTTATCCGGTCTGCGCCAATCTTACCTCCTTAAATTTGAGCTATGCCGATGTTAACGCGCATCAGCTGAAGGCAGTTATTCGCCTCTGTCATAAGCTGCAGATATTCTGGGTACTTGACTCGATATGTGATGAAGGACTTCAGGCAGTGGCTGCTACTTGCAAGGACTTGCGTGAGCTTCGGGTTTTTCCTGTGGATGCAAGTGAGGAGACTGAAGGGCCTGTCTCTGAGGTGGGGTTTGAAGCGATTTCGCAGGGTTGTAGGAAGTTGGAATCGATTCTGTATTTCTGCCAGAGGATGACTAATGCAGCTGTGGTGGCTATGTCCAAGAACTGCCCAGATCTTGTGGTGTTTCGTTTGTGTATTATTGGGCGGTATAGGCCAGATCCTGTGACTCAGGAACCCATGGACGAGGGTTTTGGTGCTATTGTTATGAATTGCAAGAAGCTCACTAGGCTAGCTGTGTCTGGTTTGCTGACTGATCGTGCTTTTGAGTACATTGGGAGGTATGGGAAATTGGTTAGGACACTGTCGGTTGCCTTTGCTGGGGCCACCGACATGGGTCTTAAGTATGTGCTTGAAGGATGCCCTAATTTGCAAAAACTTGAAATCAGGGATAGTCCTTTTGGGGATGGAGCTCTGCGATCTGGTTTGCATAATTACTACAACATGAGATTCCTTTGGATGTCGTCCTGTAGATTGACGCGCCAAGCTTGCCAAGAGATTGCACAAGCATTACCCAACCTGGTCTTGGAAGTCATCAACGAGAACGATGAGGAGAATGCAGGTGATGATATTGAGATATTGTACATGTATCGGTCACTTGATGGGCCGCGGGATGATGCCCCAAGATTTGTTAGCATCCTGCATTAG 1887 0.5448 MRENHPSTNSDDDQRSSLLDLARAEISSNSKTRNYGGFPDPGSGSGPSEPQAPFPDQVLENVLENVLHFLSSRHDRNAASLVCRSWYRAEALTRSELFIGNCYALSPARATTRFTRVKSVTVKGKPRFADFDLMPPDWGANFAPWASALAQAYPWLEKLHLKRMNVSDADLALLADSFSTFRELVLVCCEGFGTPGLANVAAKCRLLRVLELVESVVEAEDDEEIDWISCFPESQTNMESLVFDCVECPINFEALESLVARSPRLKKLRLNQFVSMAQLHRLLLRAPQLTHLGTGSFSATEPGVVGELEPDYTATFEACRSLVCLSGFREIWADYLPAIYPVCANLTSLNLSYADVNAHQLKAVIRLCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPVDASEETEGPVSEVGFEAISQGCRKLESILYFCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDPVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLVRTLSVAFAGATDMGLKYVLEGCPNLQKLEIRDSPFGDGALRSGLHNYYNMRFLWMSSCRLTRQACQEIAQALPNLVLEVINENDEENAGDDIEILYMYRSLDGPRDDAPRFVSILH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1855 628 Pfam Transport inhibitor response 1 protein domain 116 161 IPR041101 -
Pvu8g1855 628 SUPERFAMILY RNI-like 81 588 - -
Pvu8g1855 628 SMART LRR_CC_2 425 449 IPR006553 -
Pvu8g1855 628 SMART LRR_CC_2 485 508 IPR006553 -
Pvu8g1855 628 SMART LRR_CC_2 534 558 IPR006553 -
Pvu8g1855 628 Pfam F-box 56 95 IPR041567 -
Pvu8g1855 628 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 44 626 - -
Pvu8g1855 628 SUPERFAMILY F-box domain 54 89 IPR036047 GO:0005515
Pvu8g1855 628 MobiDBLite consensus disorder prediction 11 36 - -
Pvu8g1855 628 Gene3D - 50 94 - -
Pvu8g1855 628 PANTHER F-BOX PROTEIN FBX14 44 626 - -
Pvu8g1855 628 Gene3D Ribonuclease Inhibitor 96 627 IPR032675 -
Pvu8g1855 628 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1855 Pvu-Chr8 47235718 47240822 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1855 - - gmx:100807836 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1855 8 47235718 47240822 Pvu8g1855 8 47235718 47240822 ECH