Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1850 ATGGGCGATTTTACGGTTGCGTTAAACCCTTCCCAAACCTTGGGCGCCGAGATTCTACCACCCGTCAATCGCACTTACGCGGCGGCGCGTGGGCCCGTAACCAAAATCGCTTTCAAACCGCACGGATTTCGAGCAATCCGCGCCTCGGTAATGCCGAGAGAAGGCCAGCAACAACCGTCTCTGGGAGACTCTCTCGTGAACAGTCCGCACAGAAACGACGTCGTTGATGTTATCAGAAGAAGCGGACTCTCTAACTGCCTCTCCGAAACTAACCTCCACAACACCGTTCCCGGTCTCGTGTCCAAAACCCGCGGCAAAGTAAGAGATATTTACGACGCTGGGGATTACCTCGTTTTGGTGACCACTGATCGGCAGAGTGCGTTTGATAGGATTCTTGCTTCCATTCCTTTCAAAGGCCAGGTTCTGAATGAGACAAGTTTGTGGTGGTTTGAAAGAACTAAGCAGATAGTTTCTAATGCAGTTGTATCGGCTCCGGACAAAAATGTTACAATAGCTAAGAAATGCTCAGTTTTCCCTGTTGAGTTTGTTGCAAGAGGATTTGTCACTGGAAGTACTGATACATCTCTATGGACAGTCTACAATAAGGGTGCTCGGAACTATTGTGGAAATGTCCTCCCAGATGGAATGGTAAAAAATCAGAAGCTGTCTGAAAATATACTCACTCCAACAACCAAGGCTGCAGATCATGATGTTCCTGTCACTCCGGATGAGATTATAGAAAGGGGACTGATGACTCGAGCTGATTATGAAGAAGTGAGTGAAAAAGCATTATCCTTGTTTGAATATGGACAGCAAGTGGCTTCAGAACATGGCCTCATATTGGTAGACACTAAGTATGAGTTTGGGAAGGCAAATGATGGTTCAATTATGTTGATCGATGAGGTCCATACTCCTGATTCAAGTAGATATTGGATTGCCAATTCTTACCTGGAGCGCTTTCAAAATGGTCTCGAGCCTGAAAATATTGACAAGGAGTTCTTGAGGCTGTGGTTTAAAAGTCACTGCAACCCGTATGAAGATGAGGTCCTTCCTGATGCTCCCGAAGATCTTGTTTGTGAGTTATCCTGGCGATACATTTTCTTGTACGAGACTATAACCAAATCAAAGTTTGAGATTCCATCGACCGAGGAGCCTATACATGACCGAATTTCTCGAAATGTTGCATCTGCACTGTCATCTTTAAAGTAG 1209 0.4549 MGDFTVALNPSQTLGAEILPPVNRTYAAARGPVTKIAFKPHGFRAIRASVMPREGQQQPSLGDSLVNSPHRNDVVDVIRRSGLSNCLSETNLHNTVPGLVSKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVSNAVVSAPDKNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNKGARNYCGNVLPDGMVKNQKLSENILTPTTKAADHDVPVTPDEIIERGLMTRADYEEVSEKALSLFEYGQQVASEHGLILVDTKYEFGKANDGSIMLIDEVHTPDSSRYWIANSYLERFQNGLEPENIDKEFLRLWFKSHCNPYEDEVLPDAPEDLVCELSWRYIFLYETITKSKFEIPSTEEPIHDRISRNVASALSSLK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1850 402 ProSitePatterns SAICAR synthetase signature 2. 281 289 IPR018236 GO:0004639|GO:0006164
Pvu8g1850 402 SUPERFAMILY SAICAR synthase-like 98 377 - -
Pvu8g1850 402 Pfam SAICAR synthetase 103 348 IPR028923 -
Pvu8g1850 402 Gene3D Phosphorylase Kinase; domain 1 89 178 - -
Pvu8g1850 402 Gene3D - 179 322 - -
Pvu8g1850 402 ProSitePatterns SAICAR synthetase signature 1. 177 191 IPR018236 GO:0004639|GO:0006164
Pvu8g1850 402 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 34 401 - -
Pvu8g1850 402 CDD SAICAR_synt_Sc 104 373 - -
Pvu8g1850 402 PANTHER BNAC03G41880D PROTEIN 34 401 - -
Pvu8g1850 402 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 99 374 IPR028923 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1850 K01923 - gmx:100801209 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1850 8 47147651 47156061 Pvu8g1850 8 47147651 47156061 ECH