Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1847 ATGTCCATTCGCAAGGCACTCACAAATCTCCTACACACTTTCAAAGACAAAGCCTCAGTGATTGCAGCATCACTCTCAATCAAGCGTCACGTGTCCACCGTTCGCGTCCATGTCCTGCGCGCCACCACTCACCGCCTCGCCTCTTCTCCGTCGGAGTCCCAAATCGCCGACGTTCTCTCCGCAGGTCGCGGCTCTTATCTCCTGCCACGCAACTGCATAGAGGCAATCATGGACCGCCTTCACAGAACTCAAAGCGCCACGGTGGCACTGAAATGCCTCTTCACTCTCCACAACATCGTATCCGAGGGACCCTTAACGCTAAAGGACAACCTCTCGCACTACCCTTCGCACGGAGGACACAACGCTCTTAACCTCGCTACCTTCCGCGACGACACGGACGTGGAATCTCTGGAGCTCAGCTCGTGGGTTCGATGGTACGCGAATGTTCTGGAACATGTCTTGACGGTTTCGCGCGTTTTGGGTTATTATCTAACAAGCGACGGCGTCGGAAGAGAGTTTTCGGGGGTATCTAGCGTTGAGTTGCTGTGTAAAATACGAAGTTTAGTCGATTTCGTGGAGCAGGTGAGTAACGCGCCTGAGTCGCTGCACCTTCAGAGGATCGACTTGATGTACAGAATTGTGAGATTGGTTTGCGATGATTACGGGCGCGTGCAGCGTGAGATTTCACTGCATGTGGAGGAGAGTGAGAGGAGGGTGGGGGATTTGGGTGTGGACGAGTTGAGAGAGTTGGTGCAGTTTTTGAAGAGGTTGGAAGAGTGTAGGGAAAGGTTGATTGTTTTGTTTGTGAATAGAAAGAAAAACACTTTGTTTTGGGATTTGATCGGTAAGGTTAAAAGGAAAGGGGTGGAAGAAATGGAGGATATGGAAGGAATGTGGTTGACTGTGGTGATTGACGGTAGGAACGATTTGACTCACTCGACTCGGTTCACCAACCCTTTTCTTGAGCCCGGCGAAATTTTATATTCCGGTCCCACCGGGTGGCGCGTGGCCACATGTCAGCTAACTGTTCAAACGTTGGGATGA 1044 0.5144 MSIRKALTNLLHTFKDKASVIAASLSIKRHVSTVRVHVLRATTHRLASSPSESQIADVLSAGRGSYLLPRNCIEAIMDRLHRTQSATVALKCLFTLHNIVSEGPLTLKDNLSHYPSHGGHNALNLATFRDDTDVESLELSSWVRWYANVLEHVLTVSRVLGYYLTSDGVGREFSGVSSVELLCKIRSLVDFVEQVSNAPESLHLQRIDLMYRIVRLVCDDYGRVQREISLHVEESERRVGDLGVDELRELVQFLKRLEECRERLIVLFVNRKKNTLFWDLIGKVKRKGVEEMEDMEGMWLTVVIDGRNDLTHSTRFTNPFLEPGEILYSGPTGWRVATCQLTVQTLG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1847 347 SUPERFAMILY ENTH/VHS domain 35 161 IPR008942 -
Pvu8g1847 347 Gene3D - 5 163 IPR008942 -
Pvu8g1847 347 Pfam ANTH domain 35 160 IPR011417 GO:0005543
Pvu8g1847 347 CDD ANTH_N_AP180_plant 35 157 - -
Pvu8g1847 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 345 - -
Pvu8g1847 347 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Pvu8g1847 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 345 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1847 Pvu-Chr8 47102490 47104038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1847 - - gmx:100817573 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1847 8 47102490 47104038 Pvu8g1847 8 47102490 47104038 ECH
Pvu8g1847 8 47102490 47104038 Pvu9g0352 9 7348523 7349896 PCT