Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1799 ATGCAGAAGAAGCTAGGATTCCCAATCTCCAAGAGTCTGGACCAATTCAAATCGTTGTACGGTTCCATTTCGGGAACTTCAAAGCCATTATCTGCGCGTCCTTCTGTGGATTCCATTTCATCGGGAAGTTTTGCAAACCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTGTATGAATACATTGGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAGCTCAAGGTCAAGCAGAAGGAAGAGGAGAAACTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTCTGTGATCAACTTACTGAGACTTTACAGAAGTTGGCTGGTCTAGTTCAGGATGCCGAAAAAGATAAGGAGACATTGGAAAATAAACTGTCAGCAAGTTCAGAAGCTCTTGATAGCTTGAATAAACAAATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGAACCCGTGATAACGAGCTAGAGAAGCTCAAACTTGCTTCAGAAGAAAAAGAGAAATTTCACAGAGATGATCTTTGCAGAGTTGCCAATGTTGTACAAGAGAAAGATAATATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAATTTGGAAGATGTTCACCTTCAGTTAAAAGTTAAAGAAGATGAAATTATGCATCACATAACCAGTCAAGAGAAATTGGAGAAGGAAAAGAGTGATCTTCAATTGTTGAATGCTGGGCTTGAAGAAAAGCATGACATGTCACTTCAGGAAATTGAAAATCTTAAAGAAACACTTCAGTCATTGGCTGCACATTTGTCAAATTTAGACAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATTTACTCTATGCTTCTTGCTTCCAGTTGGTTCAGAAGGAGAGAGAAACTTTCTCAAAACATGCTCAATACCTGTATAGTGAGCTTAATAATAAATTTGTGGTCTTGGAATTAGAAAAGAATGCAACTCAAATGAAAAATCTTGAGTTAAGCAAAACTGTGGATGAACTTCAGAAAGTTCAAGAATCTACTGTAGCCCAACTTACGGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGTGTCAGAAACTGAGACTTTAATCTCAAAAAAGAAAGAAGCAGAGGTATTAATTTCCAAATTAGAAGAGAAAGCTGAATGTCTGTTAGAAAGTTCTAGATCATCAGACAACCACGTGCAAGACTTGCTGCTGAAGGTTTCAGCATTAGAGACTGAAAGCAAAGAAAACACAGGAAGACTGCAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTTTGCAAAAGGAGAGAATAAAACTAGAGCAGCATGCCGATTCTCTTGATCAAGAAGTAATCCAGCTTCATAGTGTCCTGGAGGAAAAGGAACAGCGTGTTTTACAGCATAAGGAACAGGAAAAGAAGCTAGAAGATCAAATCACAGAGAACATATCATTATTGAATGCTGTTGAAAGCAAACTTTCAGAAGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATCAATGAAATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTCAATATGGAAAAAGACAAGACAGACAAAACTATTGCCGAAATTGAGGGAAGGTGTGATAAAAAACTTGCAGAATGCAACGAAGAATCAAAGCAGCAGTTGATGCGCATTCAGGAGGAACACACGGTGCTGGTTACTCAAATGCGGGAGGAGCATGACAAGAGGCAACTAAGTCTCATAGCTGAACACGATGTACAGCTACAGCGTACCCAACTGCAGGCCGAAAAAGAACTGAGAGAGAAAACAATGTTTATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTCGGAAGCTGGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAGAGAAGGAGTTCTTGTGGTGGCAAAAGAAATCTGCAGCATGACGTAGACTCTCCTTACTTTGAAGCAGCACAAACACCAGTACCAAAGTTGTTGAAAAAAGTGGACAACATTAAAACAGGAAGTGCAGTGAATATTCCTAAGAGTCATAGAAAGGTAACTCGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAAAAATCACAAAGAAAAGAAAAACAAGAAGTACTGTCATGTTTGAGGATTCTAGAAATCGAAAGATAAATACACCAAAAGTAAATACTCCTCGAAGTGTTGTTAAGAAGGGTCTCTTAATCCTTATGCAGATGATCCCTATGCATTTGATTAGAGCTGCCGATGATAGAATAATAGATAGCTGGTCAACACAAGTTATTTGA 2598 0.3822 MQKKLGFPISKSLDQFKSLYGSISGTSKPLSARPSVDSISSGSFANLKLTAEKLVKEQASVKTDLENANAKLKKSQECMNTLEEKLQNALNENAKLKVKQKEEEKLWKGLESKFSSTKTFCDQLTETLQKLAGLVQDAEKDKETLENKLSASSEALDSLNKQMDGLSLKLDSAQETIRTRDNELEKLKLASEEKEKFHRDDLCRVANVVQEKDNMIRNLEEMLTSSRLATENLNSNLEDVHLQLKVKEDEIMHHITSQEKLEKEKSDLQLLNAGLEEKHDMSLQEIENLKETLQSLAAHLSNLDKESLNLLSKFDEMNLLYASCFQLVQKERETFSKHAQYLYSELNNKFVVLELEKNATQMKNLELSKTVDELQKVQESTVAQLTEDSRLAAERIQSLVSETETLISKKKEAEVLISKLEEKAECLLESSRSSDNHVQDLLLKVSALETESKENTGRLQAEILKKSEEIDTLQKERIKLEQHADSLDQEVIQLHSVLEEKEQRVLQHKEQEKKLEDQITENISLLNAVESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINEIKRKYELEKMEIVNMEKDKTDKTIAEIEGRCDKKLAECNEESKQQLMRIQEEHTVLVTQMREEHDKRQLSLIAEHDVQLQRTQLQAEKELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKRNLQHDVDSPYFEAAQTPVPKLLKKVDNIKTGSAVNIPKSHRKVTRHEYEVETSNGRKITKKRKTRSTVMFEDSRNRKINTPKVNTPRSVVKKGLLILMQMIPMHLIRAADDRIIDSWSTQVI* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1799 865 Coils Coil 121 190 - -
Pvu8g1799 865 Coils Coil 640 660 - -
Pvu8g1799 865 MobiDBLite consensus disorder prediction 714 744 - -
Pvu8g1799 865 Coils Coil 230 250 - -
Pvu8g1799 865 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 835 - -
Pvu8g1799 865 MobiDBLite consensus disorder prediction 725 739 - -
Pvu8g1799 865 Coils Coil 555 586 - -
Pvu8g1799 865 SUPERFAMILY Tropomyosin 77 300 - -
Pvu8g1799 865 Coils Coil 526 546 - -
Pvu8g1799 865 Coils Coil 51 106 - -
Pvu8g1799 865 Coils Coil 456 518 - -
Pvu8g1799 865 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 835 - -
Pvu8g1799 865 Coils Coil 258 306 - -
Pvu8g1799 865 Coils Coil 666 686 - -
Pvu8g1799 865 Coils Coil 403 430 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1799 - - gmx:100788684 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1799 8 45586488 45596796 Pvu8g1799 8 45586488 45596796 ECH