Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1796 ATGCAGGGGTGTAGGAAGAAATACCCAAGAAAAAATAACAGAAAAGAAAGGGAATGGGCCCTAAGGCCTAAACTTTACGGATTCAACCAAGCAACGCCATTGTACTTGTCTGAATTGGCTCCAACCAGATGGCGAGGCGCGTTCAACACCGGCTTCCAATTCTTCATCGGAATCGGCGTGGTGGCGGCGAACTGCATCAACTACAGCACCGCGAGGGTTCCATGGGGGTGGCGCATGTCCCTGGGCCTCGCCACAGTCCCCGCAATCATCATGACAATCGGTGCCTTCCTAATCCCCGACACTCCGAACAGCCTAGTAGAACGCGATCGCATAGACGAAGCTCGAAATGCCCTCCGCAAAGTGCGGGGCCCCACCGTGGATGTGGAACCGGAACTCCAACAACTCATTAAATTGTCGCAGCTTTCCAAAGCCATGGAAAAGGAAAGCGTTAGGACCATTGTTGAGGAACAGTACCGGCCTCAGTTGGTGATGGCGTTCGTTATTCCACTGTCTCAGCAGCTTACGGGGATCAACATTGTGGCTTTCTATGCTCCTAACCTCTTTCAGTCTGTGAGCTTCGGCAATGACTCTGCGTTGCTTTCCGCCGTTATACTCGGACTCGTCAACCTCGCTTCCATCCTCGTCTCAACTGCGGTTGTCGATCGATTTGGCAGAAGATTCTTGTTCATAGTCGGTGGCCTTCAAATGCTTCTCTGCATGCTTGCGGTGGCTATTGTGCTGGCAGTGGAGAGTGGTGTTCATGGTACAGAGAACATTTCAAAGGGCAACACCATATTGGTACTAGTATTGTTGTGCTTCTACGCTGCAGGTTTTGGTTGGTCCTGGGGCCCTCTTTGCTGGCTAATTCCGAGTGAGATTTTTCCCTTAAAGATAAGATCCACTGGACAAAGCATTGCCGTGGCAGTGCAATTCTTGACCGTCTTTGTTCTATCCCAGACGTTCTTGACAATGCTTTGCCACTTTAAGTTTGGGGCTTTCCTCTTCTACGCGAGTTGGATTGCAGTCATCACCATCTTTATCATACTGTTCTTGCCCGAGACCAAAGGAATTCCTTTGGATTCAATGAATGCAATATGGAGCAAACACTGGTATTGGCGAAGGTTTATGGTTAAAGGACAAGTTAGCCGAGATAATCATCCAATGACTAGTTAG 1173 0.4936 MQGCRKKYPRKNNRKEREWALRPKLYGFNQATPLYLSELAPTRWRGAFNTGFQFFIGIGVVAANCINYSTARVPWGWRMSLGLATVPAIIMTIGAFLIPDTPNSLVERDRIDEARNALRKVRGPTVDVEPELQQLIKLSQLSKAMEKESVRTIVEEQYRPQLVMAFVIPLSQQLTGINIVAFYAPNLFQSVSFGNDSALLSAVILGLVNLASILVSTAVVDRFGRRFLFIVGGLQMLLCMLAVAIVLAVESGVHGTENISKGNTILVLVLLCFYAAGFGWSWGPLCWLIPSEIFPLKIRSTGQSIAVAVQFLTVFVLSQTFLTMLCHFKFGAFLFYASWIAVITIFIILFLPETKGIPLDSMNAIWSKHWYWRRFMVKGQVSRDNHPMTS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1796 390 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 355 IPR020846 GO:0022857
Pvu8g1796 390 Gene3D MFS general substrate transporter like domains 26 369 IPR036259 -
Pvu8g1796 390 PANTHER SUGAR TRANSPORTER 29 380 - -
Pvu8g1796 390 TIGRFAM SP: MFS transporter, sugar porter (SP) family 28 360 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pvu8g1796 390 CDD MFS_STP 27 353 IPR044778 GO:0015145|GO:0015749
Pvu8g1796 390 Pfam Sugar (and other) transporter 29 366 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu8g1796 390 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 29 380 IPR045262 GO:0015144
Pvu8g1796 390 SUPERFAMILY MFS general substrate transporter 28 360 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1796 Pvu-Chr8 45501119 45503846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1796 29 375 Organic Solute Cotransporters AT1G34580 61.714 2.18e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1796 K24193 - gmx:100783916 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1796 8 45501119 45503846 Pvu8g1796 8 45501119 45503846 ECH
Pvu8g1796 8 45501119 45503846 Pvu9g0317 9 6718820 6721951 PCT