Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1787 ATGGAAGGCATAATGAGCAAGCTCCGCAACCTCGATGCTTACCCTAAAATCAACGAAGATTTCTACAGCCGCACGCTCTCCGGCGGCGTTATCACCCTCGCTTCCTCTATCATCATGCTTTTGCTCTTCTTCTCCGAGCTCCGGTTGTACCTCCAGTCGGTCACCGAGACCAAGCTTGTTGTAGACACTTCCAGAGGCGAAACGCTGCGTATAAACTTTGATGTCACGTTTCCTGCGCTTCCGTGTTCCATACTTAGTCTCGATGCCATGGATATCAGCGGAGAGCAGCATCTAGACGTTAAACATGATATAATCAAAAAGAGATTAGATTCTCACGGCAATGTGATTGAAACGAGGCAAGAAGGAATTGGCGCTCCCAAGATTGAAAAGCCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGTGGTTCCTGTTTTGGTGCTGAAGCGTCAGATGATGATTGTTGTAATTCCTGCGAGGATGTTCGTGAAGCATACCGTAAGAAAGGATGGGCACTTTCAAACCCAGATTTAATTGATCAGTGCAAAAGAGAAGGATTCTTACAAAGAATCAAGGATGAAGATGGCGAAGGATGCAATGTGTATGGTTTCTTGGAAGTAAATAAGGTTGCGGGGAACTTTCATTTTGCCCCTGGGAAAAGCTTTCAGCAATCTGGTGTACATGTGCATGACCTGCTGGCCTTTCAAAAGGATTCTTTTAATTTAAGTCACCACATCAACAGATTATCTTATGGAGAGTATTTTCCTGGTGTTGTCAATCCTCTTGACAATGTGCATTGGATACAAGAAACACCAAGTGGGATGTACCAATATTTTATTAAGGTTGTGCCGACTGTTTACACTGACGTGAATGGGCATGCTATCCAGTCAAATCAGTTCTCTGTGACGGAACACTTCAGGACTGGAGATGTGGGCCGTCTGCAGTCCCTCCCTGGAGTTTTCTTCTTCTATGACCTTTCTCCAATTAAGGTTACTTTTACCGAAGAACATGTCTCATTCTTACATTTTCTTACTAACGTGTGTGCTATAGTTGGAGGTATTTTTACCGTTTCTGGAATACTAGATTCATTTATTTATCACGGTCAAAGGGCTATCAAGAAGAAGATGGAACTTGGTAAATTTAACTGA 1161 0.4341 MEGIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSIIMLLLFFSELRLYLQSVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQEGIGAPKIEKPLQRHGGRLEHNETYCGSCFGAEASDDDCCNSCEDVREAYRKKGWALSNPDLIDQCKREGFLQRIKDEDGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNLSHHINRLSYGEYFPGVVNPLDNVHWIQETPSGMYQYFIKVVPTVYTDVNGHAIQSNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQRAIKKKMELGKFN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1787 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Pvu8g1787 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
Pvu8g1787 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 1 386 - -
Pvu8g1787 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 386 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1787 Pvu-Chr8 45162901 45171300 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1787 K20367 - gmx:100782309 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1787 8 45162901 45171300 Pvu8g1787 8 45162901 45171300 ECH