Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1778 ATGGATGTGAGAATAGTGTTTGTGTGTGTTCTTCCGGTAATGGTTTCAGCCATACGTCCTCACCTAACCCCTTTCTATGTCAAGGGTCGTGTCTATTGTGACCCTTGTCGTGCTGGTTTTGAGACACCCCTCACCACCTACATTGCTGGTGCGGAGGTTACTATGGAATGCAGGGACAGAATGAGAGGTAACATTGTGTACAGCAAGAAGGTTAAGACCGATTCCTCAGGATCATATACGATCTTCGTGGACGCGAATCAAGCAAACCAAAATTGTGATGCGAGTCTTGTAACCAGTCCTCTACGTGACTGTAGAGAACCCACTCCAGGGCGTGACCACTCACGTGTTGTTCTCAATCGCTTCAATGGTATTGCTACCAATGATAGGTTTGTCAACAACTTGGGTTTCATGAAGCAAAAGGTTGCATCTGCTTGTGCAAAGATTCTCAGGCGATACCGAGAGCACGATGATGATGGGAATTAG 483 0.4658 MDVRIVFVCVLPVMVSAIRPHLTPFYVKGRVYCDPCRAGFETPLTTYIAGAEVTMECRDRMRGNIVYSKKVKTDSSGSYTIFVDANQANQNCDASLVTSPLRDCREPTPGRDHSRVVLNRFNGIATNDRFVNNLGFMKQKVASACAKILRRYREHDDDGN* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1778 160 Pfam Pollen protein Ole e 1 like 27 109 - -
Pvu8g1778 160 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 3 157 IPR006041 -
Pvu8g1778 160 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1778 Pvu-Chr8 44781332 44783037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1778 - - gmx:100796594 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1778 8 44781332 44783037 Pvu8g1778 8 44781332 44783037 ECH
Pvu8g1778 8 44781332 44783037 Pvu9g0298 9 6429601 6431186 PCT