Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1759 ATGTCTTACCAGCTGTCATGTGTTGTGTGCGTACCCCGTGCAATTTGGGTTCAACCTAACACAAATCATAGCAGTTCCAAGTCTGACAGAGCACAGAGAATTGAGTATCTCACAAAAATCCCTCGGAGTGTCAACTTGGAGAGCCTGCAGAATGGCTATTTGTTTCCTGAGATATCCATGCGAGAGTCTGATTATGCTCAAAGGAATCCACATGCAAGATTGATAAGACTTGGAATTGGGGATACCACACAGCCAATACCAGACATCATAACTTCAGCTATGGCAGAGCAAGCATTGGCTCTATCCACAGCACAAGGCTATAAGGGTTATGGACCTGAGCAAGGCAACAGGGAGCTAAGAAGGGCAATAGCAGAAACACTTTACCAAGATATGCAAGTGAAAGAAAATGAGATTTTTGTGTCTGATGGTGCACAGTGCGACATTTCTCGTGTTCAGATGCTTCTGGACGCTAGTTTGTCAATAGCGTTGCAGGATCCAACTTTTCCGGGATACGCAGATTCCAGCGTGATTGTTGGTAGGGCTGGAAGGTTGAATGCAGGGAATGGAAAATACAAAAAGATTGTGTACATGGAGTGTGTAGCTGAGAATAATTTCTTTCCAAACCTATCAAGAACTCCAAGGACTGATTTGATTTTCTTTTGTTCTCCAAACAATCCAACTGGTAGTGCTGCGTCTCGGCAGCAACTTGAGCAACTCGTGGAGTTTGCAAAAGCGAATGGGTCTATCATCATTTATGATTCTGCTTATGCGGCTTACATTTCTGATGAAAGTCCCAAATCAATTTTTGAAATTCCTGGAGCCAAAGAGGTGGCAATTGAAATTTCCTCATTTTCAAAGTTTGCTGGTTTCACTGGTGTGAGGCTAGGGTGGACAGTTGTGCCAGAAGAGTTGTTGTATGCTAATGGTTATCCCGTCATAAGGGATTATGATCGCATTGTTTGCACCTGCTTCAATGGTGCATCCAATATTGTTCAAGCTGGTGGACTTGCTTGCCTTTCTCCACAAGGATTTCAGGCATTGAAAAGAACGATGGGATACTACATGGAAAATGCGAAGATACTTGTTGAGACGTTTGAGTCAATGGGTCTAAAGGTGTATGGGGGCAAAAATGGGCCTTATGTATGGGTTCATTTTCCAGGGTTGAGTTCATGGCAAGTCTTCAACCAATTTCTTGAGAAAGCAGCCATTGTCACTGTCCCTGGCATTGGCTTTGGTCCCGCAGGCGAGGGCTATATTCGAGTTAGTGCTTTTTCTCACAGAGAATCTATTTTGGAAGCTTCAAGGAGATTCACCAAACTAATATAA 1326 0.4344 MSYQLSCVVCVPRAIWVQPNTNHSSSKSDRAQRIEYLTKIPRSVNLESLQNGYLFPEISMRESDYAQRNPHARLIRLGIGDTTQPIPDIITSAMAEQALALSTAQGYKGYGPEQGNRELRRAIAETLYQDMQVKENEIFVSDGAQCDISRVQMLLDASLSIALQDPTFPGYADSSVIVGRAGRLNAGNGKYKKIVYMECVAENNFFPNLSRTPRTDLIFFCSPNNPTGSAASRQQLEQLVEFAKANGSIIIYDSAYAAYISDESPKSIFEIPGAKEVAIEISSFSKFAGFTGVRLGWTVVPEELLYANGYPVIRDYDRIVCTCFNGASNIVQAGGLACLSPQGFQALKRTMGYYMENAKILVETFESMGLKVYGGKNGPYVWVHFPGLSSWQVFNQFLEKAAIVTVPGIGFGPAGEGYIRVSAFSHRESILEASRRFTKLI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1759 441 PANTHER AMINOTRANSFERASE 10 440 IPR019942 GO:0008483
Pvu8g1759 441 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 43 439 IPR019942 GO:0008483
Pvu8g1759 441 SUPERFAMILY PLP-dependent transferases 53 437 IPR015424 -
Pvu8g1759 441 Gene3D - 84 341 IPR015421 GO:0003824
Pvu8g1759 441 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC-RELATED 10 440 - -
Pvu8g1759 441 Pfam Aminotransferase class I and II 74 423 IPR004839 GO:0009058|GO:0030170
Pvu8g1759 441 CDD AAT_like 75 437 - -
Pvu8g1759 441 Gene3D Aspartate Aminotransferase, domain 1 54 437 IPR015422 GO:0003824
Pvu8g1759 441 Hamap LL-diaminopimelate aminotransferase [dapL]. 41 440 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1759 Pvu-Chr8 44285983 44289614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1759 K10206 - pop:7495130 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1759 8 44285983 44289614 Pvu8g1759 8 44285983 44289614 ECH