Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1729 ATGCATTCCTTCTGCTGTGTCTCCATCGTCTCCGACCACTCTTCTCCGGTCACCCTCGACATGCCCCCTATCTCCACCACATCCAGATCCGACCCTGCCCCTCGACCGGAAGAAGCCCTCCACTCCGTCACCAACGGTGGGGAAGGCGGCCGCGCGCACCCCCCGTCGGTTCCGGCCGTGGTGGACTTCAGGATCAAAGACCTCATCGGGAACGGAATCTCCGGGATTCTGCGCAAGTGGGTGAACTACGGCAAAGGATGGAAAACGCGCTGGTTCGTGCTTCAAGACGGCGTCCTCTCCTACTATAAAATTCACGGAAACGACAAGATCATCGTAAACTCCGAAACCGAGAAGGGATCGAAGGTCATTGGCGAGGAATCCGCGCGAATGATCTCTCGCAATCGCAATTCGAATCACGTCGACCGCCGCCGAAAGCCCGTCGGCGAAATCCATCTCAAGGTTTCGACTATTCGTGAGAGCAAGTCCGATGACAAGAGGTTTTCTGTTTTCACTGGGACTAAGACACTCCATTTGAGGGCCGAGACTCCTGATGATAGGGTGGCATGGATGGAGGCCTTGCAGGCAGTGAAAGATATGTTTCCCCGGATATCCAACAGTGAGTTGATGGCGCCAGTGGACAGTGTGGCTGTTTCGACTGAGAAACTGAGGCATCGGCTTATGGAGGAAGGAGTAAGTGAGGAAGCCATTCGGGACAGTGAACAAATAATGAGAAATGAGTATGCTGCGCTGCAAAACCAGCTTCTGCTGCTTAAACAAAAGCAGATGGCTCTAATCGACACTTTGCGGCATTTAGAGACAGAAAAGGTTGATCTGGAGAACACTGTGGTTGACGAAAGCCAAAGACAGTTGAATGATCAAGAGGTTTCTTCTGGATTAAGGCAGGAAAAATCTAGTGCAAGTGCAACTGAGTCTGACGATGATCATGAGAGAAATGACGCAGCTGAGGAAGAAACAGATGATGAAGAAACTACCTTTTTTGAGACTCGGGATTTTCTGTCATCGTCGAATTCTTTTAAAAGTAATGCTTCGGATATTAGGGTCTCGTCTTTCTCTTCAGATGATGGACTCTGTGCCGTTGAATCTGAGGAGGATGTAGATCCTTCTATTAGATCTGTTGGAACCAACTATCCTTGTGTTAAGCGGCGAAAGAAATTACCTGATCCTGTTGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAACGAGCCTCTCTCCTCTTTGCAAAAATGCTGTGAAGAAATGGAATACTCATATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGAATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCGACTGAAGGAAGAATCTGTAAACCATTTAACCCATTACTAGGGGAAACATATGAGGCTGACTTTCCTGATAAAGGCTTTCGATTTTTCTCAGAGAAGGTCAGTCATCACCCAATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGTGGAGATAGCAACTTAAAGAGTAAATTTTGGGGTCGTTCAATTCAGCTTGATCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGTAAGGTTACGACATCAATATACAATCTCATATTGGGAAAGCTGTATTGTGATCATTATGGTACAATGCGAATACAGGGAAATCAAGATTACTCATGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCTCACCAGGTTCATGGTATTGTTCAGGATAGAAACGGGAAAATATTGTCTACTTTGCTCGGAAAATGGGATGACAGCATGTATTATATAAATGGAGACTATAGTGGGAAGGACAAGGGTTATGAATCAATGTCAAATGCCCATCTAATATGGAAGCGGAGCAAGCCGCCCAAGTTCCCCACTAGATACAACTTCACTCGGTTTGCCATCACACTAAATGAACTTACCCCTGGATTAAAGGATAAGCTGCCACCAACTGATTCCAGGTTAAGACCTGACCAAAGGCATTTGGAAAATGGCGAGTATGAGAAGGCAAATTCAGAAAAATTGCGACTTGAACAGCGTCAACGTCAGGCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTCGTAAGAATAAAGAGAGCGGTACCCACCGCTACGTGGGAGGGTATTGGGAGGCCCGAAAACAAGGAAATTGGAACTCATGTCCTGACATTTTTGGTCAAATTCCTTCTGATCATCCTTCAGACGAAGATCGCAGTTAA 2352 0.4562 MHSFCCVSIVSDHSSPVTLDMPPISTTSRSDPAPRPEEALHSVTNGGEGGRAHPPSVPAVVDFRIKDLIGNGISGILRKWVNYGKGWKTRWFVLQDGVLSYYKIHGNDKIIVNSETEKGSKVIGEESARMISRNRNSNHVDRRRKPVGEIHLKVSTIRESKSDDKRFSVFTGTKTLHLRAETPDDRVAWMEALQAVKDMFPRISNSELMAPVDSVAVSTEKLRHRLMEEGVSEEAIRDSEQIMRNEYAALQNQLLLLKQKQMALIDTLRHLETEKVDLENTVVDESQRQLNDQEVSSGLRQEKSSASATESDDDHERNDAAEEETDDEETTFFETRDFLSSSNSFKSNASDIRVSSFSSDDGLCAVESEEDVDPSIRSVGTNYPCVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFCGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQDYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKILSTLLGKWDDSMYYINGDYSGKDKGYESMSNAHLIWKRSKPPKFPTRYNFTRFAITLNELTPGLKDKLPPTDSRLRPDQRHLENGEYEKANSEKLRLEQRQRQARKMQESGWEPRWFRKNKESGTHRYVGGYWEARKQGNWNSCPDIFGQIPSDHPSDEDRS* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1729 783 SUPERFAMILY Oxysterol-binding protein-like 398 775 IPR037239 -
Pvu8g1729 783 Gene3D - 71 200 IPR011993 -
Pvu8g1729 783 CDD PH_ORP_plant 73 205 - -
Pvu8g1729 783 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 3 775 IPR000648 GO:0008289
Pvu8g1729 783 MobiDBLite consensus disorder prediction 284 333 - -
Pvu8g1729 783 Coils Coil 708 728 - -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 18 53 - -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 316 331 - -
Pvu8g1729 783 Pfam Oxysterol-binding protein 403 758 IPR000648 GO:0008289
Pvu8g1729 783 Coils Coil 240 260 - -
Pvu8g1729 783 ProSiteProfiles PH domain profile. 70 198 IPR001849 -
Pvu8g1729 783 Coils Coil 268 288 - -
Pvu8g1729 783 SUPERFAMILY PH domain-like 73 203 - -
Pvu8g1729 783 SMART PH_update 71 200 IPR001849 -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 685 728 - -
Pvu8g1729 783 Gene3D - 700 763 - -
Pvu8g1729 783 Pfam Pleckstrin homology domain 79 194 - -
Pvu8g1729 783 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 3 775 - -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 690 728 - -
Pvu8g1729 783 Gene3D - 489 663 - -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 18 32 - -
Pvu8g1729 783 MobiDBLite consensus disorder prediction 284 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1729 Pvu-Chr8 43082264 43089999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1729 K20456 - gmx:100812036 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1729 8 43082264 43089999 Pvu8g1729 8 43082264 43089999 ECH