Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1694 ATGGACGAATCCTCGCTGCAATTAGTCTCCGAAATCGGAAGACACCTCGCTCAACGAACTCGTCCCAACAAGGACTTCATCGTCAAATCCCTCGGAAAAGCGGCAAATGCTTTGTCTCAGATAAAACAGTCTCCTCAACCACGGACGGCCAAGGAATTACAAGCTGCTAAGAAACAAGAAGATGCTCTGAAGCCCCTGTCAAATGCTGTGGTTTGTGGTGGTATGCTTCAACATGCAGATAAGGAAGTTAGACTTGTGGTTGCCACGTGTGTCACCGAGCTCTTTAGACTTATGGCACCTGAACCGCCTTTTGAAGACAAGCATTTGAGGGATGTATTTAAACTTATCATTAATTTGTTTGAGGATCTAGCTGATACTGCAAGTCCATTCTTTTCGAAAAGGGTTAAAGTATTGGAGATAATGGCTCAGTTAAAGTGTTGTGTGTTAATGCTGGAGAATAACTGCCTGGACCTAGTTCTTGAGATGTTCAATATTTTCTTCTCAGTTGTGAGAGATGAACAACTTCTCACTAGTGCCATGACTTCTATAATGATAAACATTTTGTATGATAGTGAGGAGGCTTTTCAGCAACTATTAGGAGTGGTTTTACAAAATCTTGTCAAGCAAAAAGGGGATGCAAATTTTGCTGCTGAAAACCTTGCTGCATCAGTCATCAAAACTTGTGCTCAAGAGGATGAGCTAAACCTCCTAGTTTGTGGTTTTTTAGCTTCTTGTATACATGACAGAGATGCTATGGGCAGTGCGCTTAAACAATATTACTATGAAATTTTCTCAAAAGTTTTCGACTGTGCGCCTGAGATGCTTGTGTCTGTCATCCCAAGTTTAATCAAAGAATTATCGGCTGATGAGGTTGATGTTCAGATAAAAGCTATAAATTTGGTGGGGAAGCTTTTTGCACTTCAACATCGTGTTGCTCAGAACTATCCTCTTCTTTTTATGGAGTTTTTGAAAAGATTTTCTGATAAATCTGTGGATGTTAAGATTAGTGCCCTACAATGTGCTAAAGTTTTCTATTTAGCAAATCCCTGTGATGGTACAGAATCATGTGATATTATGACTTGTGTTGAAGATCGATTATTAGACTCTGATGAACAAGTGAGAAAGCAGGCAGTGTTTGTCGCCTGTGATATTTTTAGTTCAAACCTAAAACTTGTTTCATCCAAACTACTATCTCAAGCCACCGAAAGACTTCGGGATATAAAGATAACTGTTAGAAAAAGTGCCTTGCAAAAGTTGATCAGGGTATATCGAGATTACTGCAAGAAATGTTATGAAGGTAGCATGGAAATTAGTAATCACTTTGAAGAGATTCCCTGTAAAATTATGAGGCTGTCCTATGATAAAGATTGTAAGGAGTTCAGGTTCCAGAACTTGGAATTTGTTCTTTCTGATGATCTATTCCCTGAGGATCTTCCAATTGAGGAAAGGACAAACCATTGGATACACATGTTTTCTCTTTCCCGTTTTCCTCTTGAAAAGGCGCTGGATATTATTTTGGTTCAAAAGAGAAGGTTCCAAAATGAAATGAAAAACTATTTGACTATGCGGAAGAAAATGAAGGAAATTTGTCTTGAAGAAATGCAGAAGAAGATTGATAGTATGTTTACAAAATTGGCAGCATTCTTCCCGGATTCTCACAAAGCTGAAGAGTGTCTGCATAAGTTAAACCAAATTAAAGATAATAGTGTGTTTAATTTACTTGAACAATTGTTGGAGGAACAAGACTTCACCATGATTGGACAAACTATGAAAGATAAACATCTGGTAATGATTGGAGATTATGAGTTTTTACGTCCACTATTCTCCAAATGTTCATCCAACATTTTCGGCTCAGAGCATGTCAAATGTATCTTAGATTATCTTACCAATAATGAAAATGGAAATAGGAATTTGGAGGATTCTTCTGCTAATCTTCTGCTGGCTATTGTTCGATATTTCCCCTCTATGGTGAAAGGTTTGGAAAAACAGTTCTTATTGTTGTTGGAACAGAAAAGTCCTGTTAATGACAAGCTGATTGAAGTTATAGCAAAGGCAGGCTGTCATATGTCTTTCAATCATAGTGATATTTATCCATTTTTAAGGAGACTTTGCTTGGATGGAACACGCAGACAGGCCAAATTTGCTGGTTCTGCGATTGTTGCTTTACGTTTTGAACAATCAGTTTTTAGAGAGTTATATGAGGAGCTAATTGATTCTTTATATAGTGAGCGGAATGTCCCTACTATTTTGCAATCTCTGGGATGCATTACACAATATGTTTCCAATTTTGAAACTCGAGTTGAAGAGATCACGTCATATATATTCCAGAAGATCATTCAAATGGAGCATTTGGATGATGGTCATTATGTGACATCCTTGGGTGACACTGCTCAATGTAGCGAATTTTGTCAATTGAAGATTACAACAACCTCCTTCATTGTTGTGGAATCACACCCACTAATGCTGCTGCTCATAGTTGACGTTGCCATTGCCACTAACACCACTATTGCAGCTGTCGGCATTGCTGTTGACACTACCCTTGTCACTGCATTCTGTTGA 2559 0.3822 MDESSLQLVSEIGRHLAQRTRPNKDFIVKSLGKAANALSQIKQSPQPRTAKELQAAKKQEDALKPLSNAVVCGGMLQHADKEVRLVVATCVTELFRLMAPEPPFEDKHLRDVFKLIINLFEDLADTASPFFSKRVKVLEIMAQLKCCVLMLENNCLDLVLEMFNIFFSVVRDEQLLTSAMTSIMINILYDSEEAFQQLLGVVLQNLVKQKGDANFAAENLAASVIKTCAQEDELNLLVCGFLASCIHDRDAMGSALKQYYYEIFSKVFDCAPEMLVSVIPSLIKELSADEVDVQIKAINLVGKLFALQHRVAQNYPLLFMEFLKRFSDKSVDVKISALQCAKVFYLANPCDGTESCDIMTCVEDRLLDSDEQVRKQAVFVACDIFSSNLKLVSSKLLSQATERLRDIKITVRKSALQKLIRVYRDYCKKCYEGSMEISNHFEEIPCKIMRLSYDKDCKEFRFQNLEFVLSDDLFPEDLPIEERTNHWIHMFSLSRFPLEKALDIILVQKRRFQNEMKNYLTMRKKMKEICLEEMQKKIDSMFTKLAAFFPDSHKAEECLHKLNQIKDNSVFNLLEQLLEEQDFTMIGQTMKDKHLVMIGDYEFLRPLFSKCSSNIFGSEHVKCILDYLTNNENGNRNLEDSSANLLLAIVRYFPSMVKGLEKQFLLLLEQKSPVNDKLIEVIAKAGCHMSFNHSDIYPFLRRLCLDGTRRQAKFAGSAIVALRFEQSVFRELYEELIDSLYSERNVPTILQSLGCITQYVSNFETRVEEITSYIFQKIIQMEHLDDGHYVTSLGDTAQCSEFCQLKITTTSFIVVESHPLMLLLIVDVAIATNTTIAAVGIAVDTTLVTAFC* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1694 852 Gene3D - 220 449 IPR011989 -
Pvu8g1694 852 Pfam Sister chromatid cohesion protein PDS5 protein 25 808 - -
Pvu8g1694 852 SUPERFAMILY ARM repeat 75 783 IPR016024 -
Pvu8g1694 852 PANTHER PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A 3 819 - -
Pvu8g1694 852 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 3 819 IPR039776 GO:0007064
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1694 Pvu-Chr8 41966507 41979705 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1694 K11267 - gmx:100777822 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1694 8 41966507 41979705 Pvu8g1694 8 41966507 41979705 ECH