Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1692 GAAAATGATAAGGCTCATATTAGATTAGCTGCGGCAAAGGCAATCATTCGTCTTGCTAGAAAGTGGGATTTACATATTACTCCTCAGATTTTTCAGTTTTGTATATTGATTGCAAAGGACTCTTCTTTGTTTGTTAGTAGCACTTTTCTTTGTAAGACCCAAAAGTTGTTGAAAGAGCATAAATTACCAATGAGATTTGCTTGTGCTTTTGCTTTGGCAGCGACAAATGGTACTGGCAATCAGCAATATGAGAACTACAAGTATATGGCAGAGTTTATAAGGGATTACAGTATAGTAGCCCATAAGCGAGAAACTTCTGCTACTCAAGGAGTCATCATTGATTACCCAGCATACATTTTGGTCTTCTTGATCCATGTGCTTGCTCGGAGTAATGACTTTCCATTTGAAGTTTGTCCAGATGAAAAAATTTATGCTGACGTTTTCCGTCCACTTTTCTTTCTCCTGCAGGCATTAGTTGATATCAATATTGTTAATGGTCACCTGAACATTGTCGATGATGCTTTCCAACATACAGTTAGTATTTTTCGAGCAATCAGAATGGTTGAGGATGCTGTTGATGCACAAATGACAACTAAGCTGCACATGCTGGCTGAATTTGGGATATTTACATTAAACGAATTAAGTCACGGTGGAATCTCCAAATTGCAAACACCTGGAAAAATTTTATTGCCTTCATCATTATATAGAGTGACTCTCACTACTTCAAAATGTCCAAAGTCTTTTTTTGATGAAAATTTTCTAAGGAGAGTTTTTCATGCACTTAAGGAAATTACTGTGGCTCAAAAGGGGGGTGTTGGTGTGATTGATGCAAAACAGACTGCAAAAAAACTTTCTAAGCATGGTCATAAGGGTAAACAAGATGTTAAAAAGTCTAATATTAATATTGATGGTGTACTGGACTTGGCATCTAGCAAACCAGATGATTTGTCGAGGAGAGAAATAACAAATGCTAAAACTGCGAAGCCAGACATCCCTTCAATGAAAAGGAGAAAATGTGTGTCTGTATCTTCTCCTGGTTCTGTTGGTTTGCCTGAATGCTCTAAGATCGCGAAGCAACAAAAAATACCATCAAAACATTGTGGAAAGACAATAGAGAAAAACATCCTTTCGTCAAGTGATTCTGTGTGCTCTAAGGGTTCTCTGTATGAATCACATGTGCAAACCCGTAAATCAAAAAGAGCTGCTGCTTGTTCATTGGAGAATGCTGTGACAAGTAGCAAACATACTGTTGAACCTTTCAAATGTCCTAGAACCAAACGGAAAGATACATGTGACTCAAAGAAACAAGATATACTAGAAGATGTTTCGAATAAAAATAATTTCAGCCTTCGTGAACCTGGTGAATATTCTCTTGGTGGTGTAAAGCCTGCACTTACTAGACGCCTAGCTGCCAAAGAGAAAACACCACTGAATAAGGAAAATACAAATGTAAATACCAGGGGAGAATGCATGGAGACATCAGCTTCAGAAGTTGTCAGTACAAATGCAAATGCTGTTAGAAGAACAAGACGGAAAGTATAA 1542 0.3761 ENDKAHIRLAAAKAIIRLARKWDLHITPQIFQFCILIAKDSSLFVSSTFLCKTQKLLKEHKLPMRFACAFALAATNGTGNQQYENYKYMAEFIRDYSIVAHKRETSATQGVIIDYPAYILVFLIHVLARSNDFPFEVCPDEKIYADVFRPLFFLLQALVDINIVNGHLNIVDDAFQHTVSIFRAIRMVEDAVDAQMTTKLHMLAEFGIFTLNELSHGGISKLQTPGKILLPSSLYRVTLTTSKCPKSFFDENFLRRVFHALKEITVAQKGGVGVIDAKQTAKKLSKHGHKGKQDVKKSNINIDGVLDLASSKPDDLSRREITNAKTAKPDIPSMKRRKCVSVSSPGSVGLPECSKIAKQQKIPSKHCGKTIEKNILSSSDSVCSKGSLYESHVQTRKSKRAAACSLENAVTSSKHTVEPFKCPRTKRKDTCDSKKQDILEDVSNKNNFSLREPGEYSLGGVKPALTRRLAAKEKTPLNKENTNVNTRGECMETSASEVVSTNANAVRRTRRKV* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1692 513 Pfam Sister chromatid cohesion protein PDS5 protein 2 236 - -
Pvu8g1692 513 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 1 454 IPR039776 GO:0007064
Pvu8g1692 513 PANTHER PRECOCIOUS DISSOCIATION OF SISTERS 5, ISOFORM A 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1692 Pvu-Chr8 41948385 41959671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1692 K11267 - gmx:100777822 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1692 8 41948385 41959671 Pvu8g1692 8 41948385 41959671 ECH