Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1687 ATGTCTCTCATGGAGTTTTGTACCCTTACCAAGGTGTTTCACAACCCTCTTGTGTCTTCACTTGTGCTTTTGTCCATGGCTATAACATCACTCATGATCAACCCTTCAATGGCCTCTACAAAACGCTGTGATTTCCCTGCAATCTTTAACTTGGGTGCCTCAAACGCTGACACTGGTGGCTTGGCTGCTTCCTTCCCTTTTGCTGGACCAAAAGCACCCAGTGGAGACACCTTTTTTCACAGACCAGCTGGAAGGTTCTGTGATGGCCGACTCATCATTGATTTCATAGCACAGAGTTTTGGACTCCCTTATCTCAGTCCATATCTTGATTCAATGGGGTCCAACTTCTCAGGAGGAGCAAATTTTGCATCAGCAGGATCAACAATCAGACTCCAGCAATCTGTAGGGCAGTTTAGATCCAGTCCTTTCAACCTTGGATTTCAGTACTTGCAATTCGAGCGTTTTAAACCAACTTCAAAGTTCATTAGAGACCAAGGTGGAATATTTGCAACACTGATGCCCAAAGAAGAATACTTTGATGAAGCTTTATACACGTTTGATATAGGTCAAAATGATCTCACGGTTGGCTTTTTGGGTAACATGACCCTTCAACAAGTTATTCAGTCTATACCTGATATAGTATCGAACTTCACATCAAATATAAAGAACATATACAATTTGGGGGCCAGATCATTTTGGATTCACAACACTGGACCCATTGGTTGTGTCCCTATGATTTTGACCAATTTTGAATCTGCTGAAAGGGATAAGTATGGTTGTGCAAAGGCATACAATGAAGTGGCTCAGTCTTTTAACCAAAATTTGAAGGAAGCCTTGGTTCATCTTCGTCAGGATCTTCCTCTGGCTGCAATTACATATGTAGATATCTACTCTGCTAAGTACTCTCTTTTCAGCAACCCAAAGAAATATGGATTTGAGCTTCCACTTGTTTCTTGTTGTGGCTATGGAGGGAAGTACAACTTCAGCAATAGTGTTGGATGTGGAGGAACCATTAAAGTCAAGGACATTGATGTTTTTGTGGGTTCATGTGAAAAACCATCTGTTAGAGTGATATGGGATGGGATCCATTACACTGAAGCAGCTAACAAGGTTGTCTTTGATCAAATCTCTTCTGGGGCTTTCACAGATCCACCCATTCCATTGAATATGGCATGTAACAGAGAATTGACAATACACCAATGA 1203 0.4148 MSLMEFCTLTKVFHNPLVSSLVLLSMAITSLMINPSMASTKRCDFPAIFNLGASNADTGGLAASFPFAGPKAPSGDTFFHRPAGRFCDGRLIIDFIAQSFGLPYLSPYLDSMGSNFSGGANFASAGSTIRLQQSVGQFRSSPFNLGFQYLQFERFKPTSKFIRDQGGIFATLMPKEEYFDEALYTFDIGQNDLTVGFLGNMTLQQVIQSIPDIVSNFTSNIKNIYNLGARSFWIHNTGPIGCVPMILTNFESAERDKYGCAKAYNEVAQSFNQNLKEALVHLRQDLPLAAITYVDIYSAKYSLFSNPKKYGFELPLVSCCGYGGKYNFSNSVGCGGTIKVKDIDVFVGSCEKPSVRVIWDGIHYTEAANKVVFDQISSGAFTDPPIPLNMACNRELTIHQ* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1687 400 Pfam GDSL-like Lipase/Acylhydrolase 48 376 IPR001087 GO:0016788
Pvu8g1687 400 CDD SGNH_plant_lipase_like 46 379 IPR035669 -
Pvu8g1687 400 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 16 396 - -
Pvu8g1687 400 Gene3D SGNH hydrolase 35 380 IPR036514 -
Pvu8g1687 400 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 16 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1687 Pvu-Chr8 41788503 41790676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1687 46 390 Acyl Lipid Metabolism Gene Families AT4G10950 27.451 1.93e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1687 - - gmx:100818460 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1687 8 41788503 41790676 Pvu8g1687 8 41788503 41790676 ECH