Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1682 ATGGACTTTCCTAACTCTACCAAGTTTCAAATCCAACAAGTGTCACTTTTTGTGATTTTATCTATTGCTACCTTAGTTCCAAACCCAGTATTTTCAACCAATCAATGTGCTTTCCCTGCAATATTCAACTTTGGTGACTCAAACTCAGACACAGGTGGCTTAGCTGCTTCCATTATTGCACCAAAACCACCATATGGAGACACCTATTTTCACAGACCTGCAGGGAGATTCTCTGATGGCCGTCTCATCATTGATTTCATAGCTCAGAGTTTGGGACTCCCTTATATAAGTGCATATCTTGATTCCCTGGGCACCAACTTCTCACACGGTGCAAACTTTGCAACATCAGCGTCAACAATTAGACCTCCACCTAGTGTTTTACCTGAGGGTGGATTCAGCCCCTTCTATCTTGATGTTCAGTATACTCAATTCAGAGAATTCAAGCCCAGAACACAATTCATCAGACATCAAGCAGGTGGGATATTTGCTAGCTTGATGCCCCAAAAAGATTATTTTCGTAAAGCTTTGTACACATTTGATATCGGTCAAAATGATCTTGGTGCTGGCTTTTTTGGAAATTTGAGTGTTCAACAAGTCAATGCTACTGTACCTGATATAGTTAATGCTTTCTCAGAAAATGTTAAGGACATATATGATCTGGGAGCAAGATCATTTTGGATACACAACATAGGACCCATTGGATGCCTTCCTTACATTTTGGCCAGTTTTCTATCAGCTGAAAGGGATGCCTATGGTTGTGCAAAGCCATATAATGAAGTAGCTCAGTATTTCAACCAGAAATTGAAGGAAGCTGTGGTTCAACTTCGCAGAAACCTTCCTCAGGCTGCAATCACATATGTAGATATCTATTCTGTTAAGTACTCTCTTTTCAGCCACCCAAAGAAATATGGATTTGAGCTCCCACTAGTTGCTTGTTGTGGACATGGAGGGAAATACAACTACAGTAGTGTTGGATGTGGAGAAAGCATAGAGGTCAATGGAACAGAAATTTTTGTGGGCTCATGTGAAAGGCAATCAGTGAGAGTGAATTGGGATGGGATTCATTTCACAGAAGCAGCTGCCAAATTCATCTTTGATCAAATTTCTTCTGGGGCTTTCTCAGAGCCACCCCTTCCTTTGAATATGGCATGTCACAAAACTTACACAAATAATTATTGA 1179 0.4054 MDFPNSTKFQIQQVSLFVILSIATLVPNPVFSTNQCAFPAIFNFGDSNSDTGGLAASIIAPKPPYGDTYFHRPAGRFSDGRLIIDFIAQSLGLPYISAYLDSLGTNFSHGANFATSASTIRPPPSVLPEGGFSPFYLDVQYTQFREFKPRTQFIRHQAGGIFASLMPQKDYFRKALYTFDIGQNDLGAGFFGNLSVQQVNATVPDIVNAFSENVKDIYDLGARSFWIHNIGPIGCLPYILASFLSAERDAYGCAKPYNEVAQYFNQKLKEAVVQLRRNLPQAAITYVDIYSVKYSLFSHPKKYGFELPLVACCGHGGKYNYSSVGCGESIEVNGTEIFVGSCERQSVRVNWDGIHFTEAAAKFIFDQISSGAFSEPPLPLNMACHKTYTNNY* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1682 392 Pfam GDSL-like Lipase/Acylhydrolase 41 368 IPR001087 GO:0016788
Pvu8g1682 392 Gene3D SGNH hydrolase 30 372 IPR036514 -
Pvu8g1682 392 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 387 - -
Pvu8g1682 392 CDD SGNH_plant_lipase_like 39 371 IPR035669 -
Pvu8g1682 392 PANTHER ESTERASE-LIKE ISOFORM X1 12 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1682 Pvu-Chr8 41589138 41591017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1682 39 382 Acyl Lipid Metabolism Gene Families AT4G10950 27.654 1.05e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1682 - - gmx:100779094 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1682 8 41589138 41591017 Pvu8g1682 8 41589138 41591017 ECH