Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1670 ATGATGGATAAGAAGAGATGGCTATGGAAGAGGAAGTCTTCTGAGAAGAGCCCTGGTGAAACTGAAAGTTCAGGATCTGTTTCTTCTCATTCCGAGAGGTACTCAGATGAACAGGAGGCATTGAAGGAATCTCCTAGTAGAAGCAATCATTCACCTGATGTCACATCAAAAGCTACAGTCTATGCAGAAGAAGTTGACCATAGTTCATTTATCTATGAACAATTGCCTGAAGAAGTCACCTCTAAAACTGTACCAGGTACAGGCATTTCTAGTGATGGTTCATCAGAGAAGGACGAAAATGAAAACATAAAAGATGTAAAGGAAGATGTTCTAAATGATGAGTTGAGGAACATGTCAGAGAAGCTATCCGCTGAACTAGTGAATGTCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAATGAAGTGGCAGTTTTAAAGAAGCAACTTGACACAGTCATTCTCAGGAATTCAGTTTTGGAAGATCGAGTCACTCATCTAGACGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGGGAAGAGCAGGAAGAGAATATTTATGATGCTGTAGCACAAAAGACACAAGAATTGGAATCAGTCAAAATTAAACTTGAGAGCAAACTCACTGAGCTCCAAAAAAAATTAGATGCTTCTGAGGCCAAGTCTTCTGTTGACTTTGATATGTATCGAAAGGTAGAATGTTTGGAGAAAGAGAACTTGGCCCTCAGGCATGAGATTCTTGTTCAATCAGAAGAGCTGGAAATCAGGACAATTGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTGGAAAACATCAAGAAAGTAGCCAAGCTTGAAGCTGAATGCCGGAGATTGAGGAGTGTGGCTTCAAGATCTTCCTTAGTTAAGGATCATAAATCCATTGTTCAGTCCTCATTCAGTGTTGAATCTCTAACAGATAGTCAATCAGACAGTGCAGAGCCGCATACTGCAGTGGAAATTGAATCTCACAAGATGAATGGCTCAGAACCAAACAAGTCTGAGCCAAGTTGTTCTGACTCGTGGGCATCTGCACTAATTGCTGAGCTTGATCAGTTTAAGAATGAAAAGTGCAGACAAACTCCAACCAGTTCTGTTAAACTTGATCTCATGGACGATTTTCTTGAAATGGAACGCCTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCTTGGTTCAAGAGTCAGTTGTTACCAATCAATGCATAAACAAAGAAAGCTCTCTCAGCAGAGAGTTTGAGATCATGAATCAGCACATGGATGAGTTAAAAGTGAAGTTAGAGAAGGTGGAAGCTGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAGTATATTGAGGAATCACAACTTCAGTTGAGGGACGCAGGAGAGAAATTGGAGGAGTTGCAAAGAGAGCTAGAAAATGCCTACAATTCAAAGCAAAGGGTAGAAGATCACCTACTGGACATAGTGGCTGAGGCTCAAACATTATCTGTGAAGATTGAATTCTTAGAATCTGAGGTTGATAAGGAGAGGGCTGTGTCAAGTGAGATTGCAATGAAGTTTAGGGACTTGGAGGAAGAGTTGGAAAGAAAATCTGCAGAGGTTGACTCATTAGAAGCAGAGTTTGATAAGAAGAATGATGTGTCAAATAAAATTGCAATGAAGTGTAAGGACCTGGAGAAAGAGCTAGAAAGTAAATCCGACAAGGTTGACTTGTTAGAAGCAGAGATTGCTAAGGAAAGGGAGGAGTCAGATAAAATTGCCAAAAATTTGAAGGACCTGAAGGAAGTGCTAGACAGAAAATCTGCAAAGGTTGACATGTTAGAAGCAGAAGTTGCTAAGGAGAGGGATGTGTCTGATAAGATTGCAAAAAAGTGTAAGGACCTGGAGGAAGTGCTAGGGAGCAAATCTGCAAAGGTTGAGTTATTAGAAGCAGAAGTTGATAAAGAGAGGACTTTGTCAGGTAAAATTTCAATGAATTGTAAGGAGCTGGAGGAGAAGCTAGAAAGGAAATCTGCAAAGGTTGACTTGTTAGAAGAAGAGGTTCATAAGGAGAGGACTACTTCAAAAGAAATTGCAATGAAGTGTAGGGAATTGGAGGAAGAATTGCTCAGGTCAACAGCTAGCTCATATGGAGAAAAGAAGATTAAGCAGGAGGACCTAACACTGGCTGCTGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCTTTGGGAAATCAGTTGAAATCCCTGGCTACACTGGAAGATTTCCTTATTGACACTGCAAGCATTCCTGCTAGTCCATCACTCACTGCTCAGGCTCAGGCTCAGGCTGGTGGGGAGATGTGGAAGTTTCATTCCAATGGCACATTTTCACCTAAAAGAGATTCCAGTTCTTCAAGGTTGGCTGATGGTAACTCTTGTCCATCCTTAAACAAAAATGAGGAGACCTCACCGTTTTCATCATCTTCATCAACATCATCACCCGCTATGCCAAATCATGTCAGTTCTGAGAGGAGTAGAAATGGCTTTGCAAAATTTTTCTCCAGAACCAAGAGTGGGATCCGGCTAGAAATTTAG 2637 0.4141 MMDKKRWLWKRKSSEKSPGETESSGSVSSHSERYSDEQEALKESPSRSNHSPDVTSKATVYAEEVDHSSFIYEQLPEEVTSKTVPGTGISSDGSSEKDENENIKDVKEDVLNDELRNMSEKLSAELVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKQLDTVILRNSVLEDRVTHLDGALKECVRQLRQTREEQEENIYDAVAQKTQELESVKIKLESKLTELQKKLDASEAKSSVDFDMYRKVECLEKENLALRHEILVQSEELEIRTIERDLSTQAAETASKQHLENIKKVAKLEAECRRLRSVASRSSLVKDHKSIVQSSFSVESLTDSQSDSAEPHTAVEIESHKMNGSEPNKSEPSCSDSWASALIAELDQFKNEKCRQTPTSSVKLDLMDDFLEMERLVALPETKKESLVQESVVTNQCINKESSLSREFEIMNQHMDELKVKLEKVEADKAELEIALMKSEEYIEESQLQLRDAGEKLEELQRELENAYNSKQRVEDHLLDIVAEAQTLSVKIEFLESEVDKERAVSSEIAMKFRDLEEELERKSAEVDSLEAEFDKKNDVSNKIAMKCKDLEKELESKSDKVDLLEAEIAKEREESDKIAKNLKDLKEVLDRKSAKVDMLEAEVAKERDVSDKIAKKCKDLEEVLGSKSAKVELLEAEVDKERTLSGKISMNCKELEEKLERKSAKVDLLEEEVHKERTTSKEIAMKCRELEEELLRSTASSYGEKKIKQEDLTLAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLTAQAQAQAGGEMWKFHSNGTFSPKRDSSSSRLADGNSCPSLNKNEETSPFSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLEI* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1670 878 SUPERFAMILY Tropomyosin 560 772 - -
Pvu8g1670 878 Pfam Filament-like plant protein, long coiled-coil 341 428 IPR008587 -
Pvu8g1670 878 Pfam Filament-like plant protein, long coiled-coil 666 772 IPR008587 -
Pvu8g1670 878 Pfam Filament-like plant protein, long coiled-coil 132 238 IPR008587 -
Pvu8g1670 878 Pfam Filament-like plant protein, long coiled-coil 245 311 IPR008587 -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 2 504 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 559 658 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 660 696 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 693 877 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 499 560 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 693 877 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 2 504 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 559 658 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 499 560 - -
Pvu8g1670 878 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 660 696 - -
Pvu8g1670 878 Coils Coil 581 643 - -
Pvu8g1670 878 Coils Coil 539 573 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 32 46 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 1 60 - -
Pvu8g1670 878 Coils Coil 441 510 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 1 18 - -
Pvu8g1670 878 Coils Coil 686 713 - -
Pvu8g1670 878 Coils Coil 112 132 - -
Pvu8g1670 878 Coils Coil 651 671 - -
Pvu8g1670 878 Coils Coil 211 238 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 809 862 - -
Pvu8g1670 878 Coils Coil 189 209 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 803 862 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 74 93 - -
Pvu8g1670 878 MobiDBLite consensus disorder prediction 72 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1670 Pvu-Chr8 41291780 41297209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1670 - - aprc:113847186 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1670 8 41291780 41297209 Pvu8g1670 8 41291780 41297209 ECH