Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1669 ATGCTTCTCTTCTCTTCTCTTCTTCACACCCACTCTCCTTTCTTCTCCGCCATGAATGCCATCGCTACTGCTTCAGCTCTCTCTCTTCCAATTTTCCTTAGAGCTTCCAAATTTGACACAAAAAGGGATTTGAAATGTAGATTTAAAGTGTTTGCTGTATATGGAGAAGAAGACAAGAAAAATTCATGGGGTGCGCTTTTTGATGTTGAGGATCCAAGATCCAAGATTACACAGAATAAAGGGAAGGTTTTGGATGTATATCAAGCCCTGGAAGTGGCAAGACATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTTACAATCATGCTCCTCCATGAAAAGGTGGTTGAAGTACTCAATCCTCTAGCTCGTGAATTTAAATCAATTGGCACCTTGAAAAAGGAGCTAGCTGGGTTGCAGGATGAATTAGAACACGCACACAGACAGGTTCATATATCTGAAGCAAGGGTTACCACTGCTTTAGATAAGCTTGCTTATATGGAAGAATTGGTAAATGATAAGCTGTTGCAAGACAGAAGCCCAGCTGAAATTTCCCAAACATCATCTTCTCCCAGTACATCTGCAAATTCTGTAGTTACAGAAAAGAGAAGGCAGCCACGGAAAAACTTGAACATATCAGGCCCAGTTCAGTCATACCATCCCCACTTGAAGAATTTCTGGTATCCTGTTGCTTTCTCTAGCAACCTAAAGGATGATACCATGATCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTCAGAGGGAAAGATGGAAAGCCTGGATGTGTCCAGAATACTTGTGCACACAGAGCCTGTCCTCTGCACCTTGGTTCAGTAAATGAGGGTCGTATCCAATGCCCCTACCATGGCTGGGAATATACCACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTTCTGAATGTGAAAATAAAGTCAGTTCCATGCTTTGAAAAGGAGGGAATGATCTGGATTTGGCCTGGCAATGAACCACCAACAGCTACCCTTCCATCTTTACTACCTCCTTCTGGATTTGAAATCCATGCTGAGATTGTGATGGAACTTCCAATCGAGCATGGTTTACTTTTGGACAATCTTTTGGATCTTGCCCATGCCCCTTTTACTCACACTTCAACATTCGCTAAAGGATGGAGTGTTCCCAGCTTGGTGAAATTTTTGACACCTGCATCTGGCCTGCAAGGATACTGGGACCCTTATCCTATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGGAAACTGGAGGGACAAAACACCAGGGAATGTTCAACGCACCTGCACCAACTACATGTCTGTTTACCATCTTCAAAACAAAAGACAAGATTGCTATATAGAATGTCACTGGATTTCGCTCCTCTGCTTAAGCATATACCTTTAATGCAATACCTATGGAAGCATTTCGCAGAACAGGTTTTAAATGAGGATCTGCGGCTAGTGGTGGGGCAGCAGGAACGAATGAACAATGGTGCAAATGTATGGAATTTTCCAGTATCCTATGACAAGCTTGGGGTGAGATACAGATTGTGGAGAGATGCATTAGAGCGAGGAGATAAACAACTACCATTCACCTCCTAG 1638 0.4286 MLLFSSLLHTHSPFFSAMNAIATASALSLPIFLRASKFDTKRDLKCRFKVFAVYGEEDKKNSWGALFDVEDPRSKITQNKGKVLDVYQALEVARHDIQYLDWRARQDVLTIMLLHEKVVEVLNPLAREFKSIGTLKKELAGLQDELEHAHRQVHISEARVTTALDKLAYMEELVNDKLLQDRSPAEISQTSSSPSTSANSVVTEKRRQPRKNLNISGPVQSYHPHLKNFWYPVAFSSNLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSVPCFEKEGMIWIWPGNEPPTATLPSLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMQYLWKHFAEQVLNEDLRLVVGQQERMNNGANVWNFPVSYDKLGVRYRLWRDALERGDKQLPFTS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1669 545 Gene3D - 224 346 IPR036922 GO:0051537
Pvu8g1669 545 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 84 544 - -
Pvu8g1669 545 CDD Rieske_RO_Alpha_Cao 213 341 - -
Pvu8g1669 545 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 84 544 - -
Pvu8g1669 545 Gene3D - 353 541 - -
Pvu8g1669 545 Pfam Pheophorbide a oxygenase 417 512 IPR013626 GO:0010277
Pvu8g1669 545 MobiDBLite consensus disorder prediction 184 203 - -
Pvu8g1669 545 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 230 330 IPR017941 GO:0051537
Pvu8g1669 545 SUPERFAMILY ISP domain 225 334 IPR036922 GO:0051537
Pvu8g1669 545 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 271 293 IPR015881 GO:0005506|GO:0051537
Pvu8g1669 545 Coils Coil 132 159 - -
Pvu8g1669 545 Pfam Rieske [2Fe-2S] domain 230 311 IPR017941 GO:0051537
Pvu8g1669 545 SUPERFAMILY Bet v1-like 326 536 - -
Pvu8g1669 545 MobiDBLite consensus disorder prediction 184 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1669 Pvu-Chr8 41279249 41284196 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1669 K13600 - gmx:100820586 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1669 8 41279249 41284196 Pvu8g1669 8 41279249 41284196 ECH