Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1545 ATGGCAACTACATATTTCCCCCTCAGGTGGGAGAGCACTGGGGATCAATGGTGGTATGCATCCCCAATAGATTGTGCTGCTGCAAATGGACACTATGACTTGGTTCGTGAGCTTCTTAAAATTGACAACAACCACCTTTTCAAGCTCACCTCATTGCGCAGAATTCGCCGCCTTGAAGTTGTGTGGGACGATGAAGAACAGTTCAACGATGTTGCAAAGTGCCGTTCACAGGTGGCACAGAAGTTGCTTCTTGAGTGTGAGTCAAGGAAAGGGAAGAACAAGAACTCTCTCATCCGTGCAGGGTATGGAGGGTGGCTATTGTACACTGCTGCATCAGCTGGGGACTTGAGTTTTGTGCAACAACTTCTTGAGAGGAACCCTTTGTTGGTGTTCGGAGAGGGGGAGTATAATGTCACTGATATCTTTTATGCTGCTTCCAGGGGCAAGAATTGTGAGGTTTTTAGGCAGGTTTTTGATTTTGCAGTTTCTCCAAGGTTTGTCACAGGAAAAGGTGGGGTTTTGGAGGAGCATGTTGGGGATATTCCTCCTGTTTACAAGTGGGAGATGAGCAATAGGGCTGTCCATGCCGCTGCTAGAGGGGGCAGTGTGGAGATTTTGGAGGAGTTTCTTGCTAATTGCTCTGATGTGTTGGCTTATAGAGATGCTCAGGGCTCTACTATATTGCATTCTGCTGCAGGCAGAGGGCAGGTTGAGGTGGTTAAATATCTCACATCATCCTTTGACATAATAAACTCCACAGACCATCAGGGAAACGCTGCTCTGCATGTGGCTGCTTACAGGGGCCAATTAGCTGCATTTGAGGCTCTAGTTTCCGCATCTCCTGCATTGGTTTATCAGAGAAACAATGCGGGAGACACTTTCCTTCATAAAGCTGTGTCTGGTTTTCAGTCTACCTCATTCAGAAGGTTGGACAGACAGGTTGAACTTTTGAGGCAGTTAGTAAGTTGCAAAAAATTTCACATAGAGGAAGTCATCAATGTAAAGAACACTGATGGAAGAACTGCACTACATATTGCCACAATGGGTAAAATCCACACTGATCTTGTTATGCTCCTGATGACTGCTCCATCAATCAATGTGAATGTGAGTGATATTAATGGCATGACCCCACTTGATTACCTTAAGCAAAGTCCAAACACAGCAGCATCAAATGTACTGATCAGGAAGCTGGTTGCAGCTGGGGGAATGTTCCACAATCAAGGCTATAATTCAAGAAAAGCCATAGCTTCACACATGAAAATGCATAGTATTGGAGGCAGTCCTGGAACATCATTTAGAATCTCAGACACTCAGATGTTTTTGTACACAGGAATTGAGAATGCATCAGATGCTAGTACGGATCAGGGAAGTGCAGGAATGAGTTCATCTTCATCGGACCATACTGCATATGAATCAGCAGCAGAGAACAGACCCTCAACAACAAGCATAAGGCCATCGGTGGCTGCCGGGTTGAAACGAGTCCTTCAGTGGCCACTGGTGAAGGACAAGAAAGGTGAGGAGATCAGAAAATCAATGGATGAGGGTTCAGTGGACTCATGCAGAAAATGGGACATCACAGATCAAATTCCAACTCCACTAAGACAAAAGTTCTTTAGGCATTCAGCGCTTCAAAACAACAAAAGGAACCTATCTGTAAGGAGTTACCAGTCAAGTCCAAATGCTAAGAAGAGATTTGCTTCAGAACTAGTACATGTGAAGGTTTCAAGAAGATCAAGATCTAGCTCATTTTCTATATCATCATTGTCATCACCTAGATCCATAGATAAGCAAAAGGGTTTTTGTGTTGACAATGATGTTGCTGGACCATCTCGCACAAGTCACCAAAATGACAAATCAACAAATTCAGGGAAAAAAGCTTCTGTTAGCAAAAAGCTAAGGGGCCATTATTTCTGTTTTTCAAAAGCCTCAGTAGACAGGGAACAAGAAAGCCATTGTTACAAGGACCATGATGTTTTTGTGGGTGGCCTAATTGGATGA 1998 0.4404 MATTYFPLRWESTGDQWWYASPIDCAAANGHYDLVRELLKIDNNHLFKLTSLRRIRRLEVVWDDEEQFNDVAKCRSQVAQKLLLECESRKGKNKNSLIRAGYGGWLLYTAASAGDLSFVQQLLERNPLLVFGEGEYNVTDIFYAASRGKNCEVFRQVFDFAVSPRFVTGKGGVLEEHVGDIPPVYKWEMSNRAVHAAARGGSVEILEEFLANCSDVLAYRDAQGSTILHSAAGRGQVEVVKYLTSSFDIINSTDHQGNAALHVAAYRGQLAAFEALVSASPALVYQRNNAGDTFLHKAVSGFQSTSFRRLDRQVELLRQLVSCKKFHIEEVINVKNTDGRTALHIATMGKIHTDLVMLLMTAPSINVNVSDINGMTPLDYLKQSPNTAASNVLIRKLVAAGGMFHNQGYNSRKAIASHMKMHSIGGSPGTSFRISDTQMFLYTGIENASDASTDQGSAGMSSSSSDHTAYESAAENRPSTTSIRPSVAAGLKRVLQWPLVKDKKGEEIRKSMDEGSVDSCRKWDITDQIPTPLRQKFFRHSALQNNKRNLSVRSYQSSPNAKKRFASELVHVKVSRRSRSSSFSISSLSSPRSIDKQKGFCVDNDVAGPSRTSHQNDKSTNSGKKASVSKKLRGHYFCFSKASVDREQESHCYKDHDVFVGGLIG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1545 665 SMART ANK_2a 189 218 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 290 330 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 256 285 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 223 252 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 373 406 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 338 369 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 18 47 IPR002110 GO:0005515
Pvu8g1545 665 SMART ANK_2a 102 131 IPR002110 GO:0005515
Pvu8g1545 665 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 619 - -
Pvu8g1545 665 MobiDBLite consensus disorder prediction 608 627 - -
Pvu8g1545 665 Gene3D - 10 165 IPR036770 -
Pvu8g1545 665 MobiDBLite consensus disorder prediction 451 483 - -
Pvu8g1545 665 ProSiteProfiles Ankyrin repeat region circular profile. 223 243 - -
Pvu8g1545 665 Gene3D - 188 246 IPR036770 -
Pvu8g1545 665 MobiDBLite consensus disorder prediction 583 627 - -
Pvu8g1545 665 SUPERFAMILY Ankyrin repeat 22 394 IPR036770 -
Pvu8g1545 665 Pfam Ankyrin repeats (3 copies) 182 248 IPR002110 GO:0005515
Pvu8g1545 665 Gene3D - 247 403 IPR036770 -
Pvu8g1545 665 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 1 619 - -
Pvu8g1545 665 ProSiteProfiles Ankyrin repeat profile. 223 255 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1545 Pvu-Chr8 30562209 30565065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1545 195 393 Miscellaneous Gene Families AT2G31820 30.000 4.94e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1545 - - gmx:100781079 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1545 8 30562209 30565065 Pvu8g1545 8 30562209 30565065 ECH