Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1453 ATGAACAATAGAGATTCAATGGCCAAAACAACTCACATAGCAGCAATTTCAATCCCTGCATTCAGCCACCAAGCCTCCATTGTTGAGTTCTGCAAGAGACTCGTTCATCTCCATCACCACTTCCATGTGACCTGCATCTTCCCTACCATAGATGCACCTCTCCCTGCCACACTCACTCTCCTCAAATCTCTTCCTTCCAACATCAACTACACTTTCCTCCCTCCCATTAACAAAAAAGACCTACCTGAAGATGCTCCCTCAGCAGTGCAAATCCAACTCGCAGTGTCTAAATCCATGCCACATTTCCAACAAGCACTGGGGTCTCTCCTTTCAACCATGTCTCTGGTAGCTTTAATAGCGGATCCTTTCGCAAACGAGGCGCTGGAAATAGCAAAGGAGTTCAAGCTCTTGTCCTACATATACTTCCCTCCTTCTGCCATGACACTCTCACTGTTCCTCCATTTGCCAGCTTTACACCAGCAAGTTTCATGTGAATACAGAGATCACAAAGAAGCCATCGAAATTCCAGGGTGCGTACCAATTCAAGGCCGCGACCTTCCCGAGCATTTTCAAAACCGATCTAGTCTTGCTTATAAGTTAATTCTGGAGCGCTGCAAGAGACTCTCTCTTGCTCACGGTTTTTTAGTTAACAGCTTCTCCAAAGTTGAAGAAGGTTCTGAGAGGGCCTTGCAGGAACATAACAGAGCCAACAGCACTAACAGCAACAATTCTGGTGTGTATCTGATTGGGCCAATTGTACAAACGGGGTCCAGCAATGAACCAAAGGGTTCAGAGTGTGTGAAGTGGTTGGAGAATCAGAAGGCTAATTCGGTTTTGTACGTGTCGTTTGGAAGTGGAGGCACACTCTCTCAGAAACAGATCAATGAGTTAGCTTTTGGGTTGGAGTTGAGTGGTGAGAAATTCTTGTGGGTAGTGAGAGCTCCTAGTGATTCGGCAGATGGTGCTTACGTTGGTGCTTCTAGTGATGACCCTTTACAGTTTTTACCAAATGGGTTCTTGGAGAGAACCAAAGGAAGTGGCTTTGTTCTTCCTTCTTGGGCTCCACAGACCCAAATCCTTGGTCACGTTTCAACCGGTGGGTTTTTAACTCATTGTGGGTGGAATTCGGCACTTGAGAGTATTGTGTTGGGAGTGCCGATGGTTGCTTGGCCTTTGTTTGCTGAACAGAGAACGAATGCGGTTTTGTTAACTGAGGGTCTCAAAGTGGCGTTAAGGCCAAAATTTAATGACCATGGCATAGCTGAGAGGGAGGAAATTGCTAAGGTGGTGAAGGGTCTGATGGTGGGAGAAGAAGGAGATTTGATTCGTGGAAGAATTGAAAAGCTCAGAGATGCAGCTGCTGAAGCTTTAGAAGAACATGGGTCCTCCACAAGGGCACTTTACCAATTTGGCACTCAGATGGAGAGCTTTGTGGGACACTCCTAG 1446 0.464 MNNRDSMAKTTHIAAISIPAFSHQASIVEFCKRLVHLHHHFHVTCIFPTIDAPLPATLTLLKSLPSNINYTFLPPINKKDLPEDAPSAVQIQLAVSKSMPHFQQALGSLLSTMSLVALIADPFANEALEIAKEFKLLSYIYFPPSAMTLSLFLHLPALHQQVSCEYRDHKEAIEIPGCVPIQGRDLPEHFQNRSSLAYKLILERCKRLSLAHGFLVNSFSKVEEGSERALQEHNRANSTNSNNSGVYLIGPIVQTGSSNEPKGSECVKWLENQKANSVLYVSFGSGGTLSQKQINELAFGLELSGEKFLWVVRAPSDSADGAYVGASSDDPLQFLPNGFLERTKGSGFVLPSWAPQTQILGHVSTGGFLTHCGWNSALESIVLGVPMVAWPLFAEQRTNAVLLTEGLKVALRPKFNDHGIAEREEIAKVVKGLMVGEEGDLIRGRIEKLRDAAAEALEEHGSSTRALYQFGTQMESFVGHS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1453 481 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Pvu8g1453 481 Gene3D Glycogen Phosphorylase B; 264 458 - -
Pvu8g1453 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 258 403 IPR002213 GO:0008194
Pvu8g1453 481 PANTHER GLYCOSYLTRANSFERASE 9 477 - -
Pvu8g1453 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 469 - -
Pvu8g1453 481 PANTHER GLYCOSYLTRANSFERASE 9 477 - -
Pvu8g1453 481 CDD GT1_Gtf-like 12 456 IPR002213 GO:0008194
Pvu8g1453 481 Gene3D Glycogen Phosphorylase B; 12 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1453 Pvu-Chr8 23636965 23638410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1453 8 476 Glycosyltransferase AT1G01420 45.032 2.27e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1453 K08237 - gmx:100776809 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0441 10 6387428 6388846 Pvu8g1453 8 23636965 23638410 PCT