Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1178 ATGAAGAAGGTTAATGTTGAAGTGAAAGGTGAAGAGAGTGAGGAGATGAAATGGGTTCATGACTCTTCAGTGGACCACAGAGGCCAGCTTCCACTCCGAACTTCCACTGGTTCTTGGAAAGCTGCTCTCTTCATTATTGCAATTGAGACCAGCGAGAGGTTGAGCTTCTTTGGAATAGCCACTAGTTTGGTCCTTTACCTCACAAAGGTTATGCATCAAGAACTCAAAACAGCAGCAAGAAATGTGAACTACTGGTCTGGTGTCACAACTTTGATGCCACTGTTTGGTGGATTCATTGCTGATTCATACATGGGCCGTTACACCACTGTTCTGGCATCAAGCATTGTCTATCTCATGGGTTTGATTCTCCTTACTTTGTCTTGGTTCCTGCCAAGCTTAAAGCCATGTGACGACACAGGCTTATGCACTAAACCAAGGAGAATTCATGAAGTGGTTTTCTTCCTGGCCATTTACTTAATATCTTTTGGAACTGGAGGGCACAAACCCTCCTTGGAGAGCTTTGGAGCTGACCAATTTGATGAGGATCATGATGAAGAAAGGAGGCAAAAAATGTCCTTTTTCAATTGGTGGAATTGTGCACTATGCACTGGACTTGTTCTGGGAGTGACCCTCATTGTTTACATACAAGACAACATAAACTGGGGAGCTGCTGATATTATCTTCACAGTGATCATGGTTTTTTCACTCATCGTCTTCATATTAGGAAGGCCATTTTATCGTTATAGGGTACCCACTGGGAGTCCCTTGACTCCAATGTTGCAGGTTCTTGTTGCTTCCTTTTCCAAAAGAAAGCTTCCATACCCTTCTGATCCTGCTCAATTCTACGAGGTTCCCAAGTCTCTTAGCAACAATAAAAGATTTCTGTGTCACACTAACAAACTCAAATTTCTTGACAAGGCAGCGATTCTAGTCAATGAGGGAAGTTTAGGAGAGAAGCAGAGTCCTTGGAATCTAGCAACTGTAACAAAGGTCGAAGAAATGAAGCTTATTATCAACATGATTCCCATTTGGGTATCTACCATACCATTCGGCATATGTGTGGCACAAACTGCTACATTCTTCGTCAAACAAGGTACCACACTGAACAGAAATATAGGTAATGGCTTTGAGATTCCTCCAGCTTCAATCTTCACAGTTTCTGCCTTGGGAATGGTAGTTTCTGTGGCCATATATGACAAGATTCTTGTGCCTGTGTTACGAAGGGTAACACAGAATGAGAGAGGAATCAACATTCTTCAGAGGATTGGTTTTGGAATGCTCTTCTCTATTGCTACAATGATAGTTGCAGCTTTGGTGGAAAGAAAGAGGCTTGAAGCTGTTGAGAGGGATCCCTTGAAGGGTTCATTGACAATGAGTATCTTCTGGTTGGCACCACAGTTTCTCATCATTGGTTTTGGGGATGGTTTTACTCTTGTGGGCTTGCAAGAGTACTTTTATGATCAGGTTCCTGACTCAATGAGAAGCCTAGGCATAGCATTTTACCTTAGTGTAATTGGGGCAGCAAGTTTCCTGAGTAGCATGCTTATAACAATAGTTGACCACTTGACAAAGAAGAGTGGGGAGAGTTGGTTTGGCAAGGATTTGAATAGTAGTCGATTGGACAAATTCTATTGGCTATTGGCAGCCATGAGCACACTGAATTTATTCTTGTTTGCGTTTGTTGCCAGTCGATATTCCTACAAAAGGGTGCAGAAGGTAGTTGTGGCTGATTGCTATGAAGACAAAAGTGATTATGAGAGTGTGGAAACCAAGGTTTAG 1779 0.4238 MKKVNVEVKGEESEEMKWVHDSSVDHRGQLPLRTSTGSWKAALFIIAIETSERLSFFGIATSLVLYLTKVMHQELKTAARNVNYWSGVTTLMPLFGGFIADSYMGRYTTVLASSIVYLMGLILLTLSWFLPSLKPCDDTGLCTKPRRIHEVVFFLAIYLISFGTGGHKPSLESFGADQFDEDHDEERRQKMSFFNWWNCALCTGLVLGVTLIVYIQDNINWGAADIIFTVIMVFSLIVFILGRPFYRYRVPTGSPLTPMLQVLVASFSKRKLPYPSDPAQFYEVPKSLSNNKRFLCHTNKLKFLDKAAILVNEGSLGEKQSPWNLATVTKVEEMKLIINMIPIWVSTIPFGICVAQTATFFVKQGTTLNRNIGNGFEIPPASIFTVSALGMVVSVAIYDKILVPVLRRVTQNERGINILQRIGFGMLFSIATMIVAALVERKRLEAVERDPLKGSLTMSIFWLAPQFLIIGFGDGFTLVGLQEYFYDQVPDSMRSLGIAFYLSVIGAASFLSSMLITIVDHLTKKSGESWFGKDLNSSRLDKFYWLLAAMSTLNLFLFAFVASRYSYKRVQKVVVADCYEDKSDYESVETKV* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1178 592 CDD MFS_NPF5 39 567 IPR044739 GO:0042937|GO:0042938|GO:0071916
Pvu8g1178 592 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 21 577 - -
Pvu8g1178 592 Pfam POT family 107 525 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu8g1178 592 Gene3D MFS general substrate transporter like domains 10 574 IPR036259 -
Pvu8g1178 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu8g1178 592 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 96 120 IPR018456 GO:0006857|GO:0016020|GO:0022857
Pvu8g1178 592 SUPERFAMILY MFS general substrate transporter 32 567 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1178 Pvu-Chr8 13775089 13782137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1178 2 581 Organic Solute Cotransporters AT3G53960 60.410 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1178 - - gmx:100801757 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1178 8 13775089 13782137 Pvu10g0097 10 1486644 1493486 PCT