Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1174 ATGGATAGTACTATCACCCAACAAGAAGTGAGAGAACAAAAACATACCCAACAACAGCATCAGAAGCATTGTGCCCCTTTGGTGAGCCTCAGAAGGTCCACTAATCCTAACCCGGTCTCCATTCTGGTCTTCTGGGTGTCTAAATCTCTTAGAAGTTTGTGTTTCAGAGTTCAACTCTCACAAGGGTTTTGCTTGAGGAGGATTCAGTACCATGGCATGGTGATTAACTCCTCTGTCCTCTATGCTTCTTCTTCTTCTTCTTCATCTGCTTTTGTTGAAGGGAAAGCTGCTGCAATGGAGGGTTTGAGTTTGGTTGAGAAGAATGAGGTTGTTGAAGAAAGTAAAGGAAGTGAAAATGGTGGTAAGAGAGAAACTTTTGCTGATTTGATTGAAGAAAAAGGTCGTGAGAGTAGTTTCAGCTCAGATTTTCTGTCATCAGAGACCACACATGAGGAGCATAGTAGGAGTAGCACTGAGGACTCGTCTTCACCACCTTCGGTGGGGTGGACGATTCAGGAACTTGCTGCATCAGATTGTGCCAGTCCTCATGGCAGTGAAGATGGAGAGAAGAAGCACTCGGTTTTGGAGAATAAGGAGTTTAAGAAACAAGTTTCAGTCTCATCAGAGATTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCTGGTTGTGGAAATGGGGTCCCTACAGCCTTGGCCATCTCAAATTCCATAACCAATCTGTGTGCTACACTCTTTGGGCAACTTTGGAGATTAGAACCCCTGCGTTCAGAGAAGAAAGCGATGTGGCGAAGAGAGATAGAGTGGTTTCTTTCTGTCAGTGATCATATAGTTGAATTGACACCTAATTGGCAGACATTTCCCGATGGAAGCAAGCTTGAGGTCATGACTTGTCGACCGCGCTCAGATCTTTATGTCAATCTTCCAGCTCTGCGCAAATTAGATAACATGCTTCTTGAAATTCTAGATAGTTTTGTCAATACAGAGTTCTGGTATGTAGACCAGGGGGTTCTAGCTCCAGATGCCGATGGTCCATCTTCATTTCGACAGGCACTTCAGCGGCAGGAGGAGAAATGGTGGCTTCCTGTACCACGAGTCCCTCCCTGTGGTCTCCATGAAAACTCAAGGAAGCAGTTGCAGCACAAACGTGATTGCACAAACCAAATACTAAAGGCTGCAATGGCCATTAACAGCATCACTTTAGCAGAAATGGACATTCCTGAGTCCTATTTGGAATCTCTTCCAAAGACTGCTAGAGTAAGCTTGGGGGATGTTATACATCGTTACATCACATCCGATCATTTTTCTCCTGAATGCTTGCTAGCTTGCCTTGATTTATCTTCGGAGCATCAAGCTATAGAGATTGCGAACCGAGCCGAGGCTTCCATGTATATTTGGCGCAAAAAGACCAACTCCAAGCCCGCAATCAGTGCCAGGTCTAGTTCAAGATCATCATGGGAAATGGTCAAGGATCTGATGGTTGATGCAGACAAGAGGGATTTGTTTGCAGAGAGAGCAGAAAGCCTTTTGCTTTCCTTGAAGCAGCGTTTTCCTGGTCTGTCTCAAACAACCTTGGATACGAGCAAAATCCAATACAACAAGGATGTCGGAAAAGCCATTTTGGAGAGCTACTCTAGAGTATTGGAGAGTTTGGCATTTAACTTGGTAGCACGGATTGATGATGTGCTCTATGTGGACGACTTGACCAAACATTCAGATCAAATCTCTTCTCTCTCAAAAGTTGGTGTAGTAACTCACAAGCAGAGTATGCCAGTTCCATACTCAGTACCTGTCCCGAGCACACCATACAAATCGGCTTTCGGCACACCAGCCCTTTCTCCATCACATAGTAGTCCTTCCAAGGGAGGGAGGTCTCTACTCAACAATGACAACAGCCTCCCCCAAAGAGGGTCAGGGGCGAAGAAATCTTTGACTGATTTTCTTAGCATTGAACCAAAAGGGAGGGACAGTGACAGTTCAATTGAGAATAGACTTGATGAAGAAGTGCCAACATGTGAAACAGATGTGGAGTCAAGTGATTGCGCAGAAGGTAGTGCCAGCCCAAGTATCCTGGACCGGAAATGGCATGTTTGA 2109 0.4495 MDSTITQQEVREQKHTQQQHQKHCAPLVSLRRSTNPNPVSILVFWVSKSLRSLCFRVQLSQGFCLRRIQYHGMVINSSVLYASSSSSSSAFVEGKAAAMEGLSLVEKNEVVEESKGSENGGKRETFADLIEEKGRESSFSSDFLSSETTHEEHSRSSTEDSSSPPSVGWTIQELAASDCASPHGSEDGEKKHSVLENKEFKKQVSVSSEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNSITNLCATLFGQLWRLEPLRSEKKAMWRREIEWFLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVNTEFWYVDQGVLAPDADGPSSFRQALQRQEEKWWLPVPRVPPCGLHENSRKQLQHKRDCTNQILKAAMAINSITLAEMDIPESYLESLPKTARVSLGDVIHRYITSDHFSPECLLACLDLSSEHQAIEIANRAEASMYIWRKKTNSKPAISARSSSRSSWEMVKDLMVDADKRDLFAERAESLLLSLKQRFPGLSQTTLDTSKIQYNKDVGKAILESYSRVLESLAFNLVARIDDVLYVDDLTKHSDQISSLSKVGVVTHKQSMPVPYSVPVPSTPYKSAFGTPALSPSHSSPSKGGRSLLNNDNSLPQRGSGAKKSLTDFLSIEPKGRDSDSSIENRLDEEVPTCETDVESSDCAEGSASPSILDRKWHV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1174 702 MobiDBLite consensus disorder prediction 1 24 - -
Pvu8g1174 702 MobiDBLite consensus disorder prediction 133 168 - -
Pvu8g1174 702 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 99 655 - -
Pvu8g1174 702 ProSiteProfiles PRONE domain profile. 200 581 IPR005512 GO:0005085
Pvu8g1174 702 MobiDBLite consensus disorder prediction 612 644 - -
Pvu8g1174 702 MobiDBLite consensus disorder prediction 612 702 - -
Pvu8g1174 702 MobiDBLite consensus disorder prediction 653 676 - -
Pvu8g1174 702 Gene3D PRONE domain, subdomain 1 441 581 - -
Pvu8g1174 702 Gene3D PRONE domain, subdomain 1 200 440 - -
Pvu8g1174 702 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 99 655 IPR038937 GO:0005085
Pvu8g1174 702 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 208 575 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1174 Pvu-Chr8 13674521 13678685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1174 - - var:108329511 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1174 8 13674521 13678685 Pvu8g1174 8 13674521 13678685 ECH
Pvu8g1174 8 13674521 13678685 Pvu10g0057 10 958344 964997 PCT