Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1171 ATGGTAAAGGACAGGAACGTTGGTGTTGCATTGGACTTCTCCAAGAGCAGCAAGGTTGCTCTCAAATGGGCAATTGAAAACTTGGCTGATGAAGGCCACACCTTTTACATCGTCCATGTCAACCCCGATTCCTCTGATGATCGTAACCAGTTGTGGGCCAAATCTGGCTCTCCTCTTATTCCTTTGAATGAGTTCAGAGAGGCAGAGGTCATGAAGAACTATGGTGTACAAAGTGATGCTGAGGTCCTTGACTTGCTTGACACTGCAACCAGACAAAAGCAGGTTAGCGTTGTTGTAAAATTGTACTGGGGTGATGTAAGAGAGAAACTTTTGGATTCCATTGAAGATCTGAAGCTGGACTCTTTGGTCATAGGAAGCAGAGGTCTCAGCACAATTCAAAGGATGATATTGGGAAGTGTAAGCAACTTCGTGATGACTCATGCTCCATGCCCAGTGACCATTGTGAAGGAGTAG 474 0.4536 MVKDRNVGVALDFSKSSKVALKWAIENLADEGHTFYIVHVNPDSSDDRNQLWAKSGSPLIPLNEFREAEVMKNYGVQSDAEVLDLLDTATRQKQVSVVVKLYWGDVREKLLDSIEDLKLDSLVIGSRGLSTIQRMILGSVSNFVMTHAPCPVTIVKE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1171 157 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 156 - -
Pvu8g1171 157 Pfam Universal stress protein family 5 156 IPR006016 -
Pvu8g1171 157 Gene3D HUPs 1 157 IPR014729 -
Pvu8g1171 157 PANTHER IMP2'P 4 157 - -
Pvu8g1171 157 CDD USP_Like 6 155 - -
Pvu8g1171 157 PANTHER OS05G0453700 PROTEIN 4 157 - -
Pvu8g1171 157 PRINTS Universal stress protein signature 4 22 IPR006015 -
Pvu8g1171 157 PRINTS Universal stress protein signature 116 128 IPR006015 -
Pvu8g1171 157 PRINTS Universal stress protein signature 134 156 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1171 Pvu-Chr8 13643824 13645186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1171 - - gmx:100306368 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1171 8 13643824 13645186 Pvu8g1171 8 13643824 13645186 ECH
Pvu8g1171 8 13643824 13645186 Pvu10g0092 10 1337670 1340223 PCT