Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1112 ATGAATCCTACTACCACTCAACCCCCACCGCCGTCTTTGCCACCTCCGTCGCTACCGCCGCCGCCGCAGCTCCAGCCCCACCGCCCCTCCACCTCCTGCGACCGCCACCCTCAGGAGAACTTCACCGGCTTCTGCCCTTCATGCCTCTGCGAGCGTCTCGCCGTGCTCGATCCCAACTCCTCATCTTCTTCCGCCGCCGCGCGCAAGCCGCCGAGCTCCTCCGCCGCCGCTGCCGCCCTTAAGACCATCTTCCGCTCCTCCGTCGCCGCGCGCCGCCCTCCGCTCTCCTCTCTCCCGGAGCTCCGCCGCACGAAGTCATTCTCCGCCTCCAAAAACGAAGCCCTTTCTGGTTTCTTCGAACCGCAGAGAAAATCCTGCGACGTGAGAGGTCGCAGCACCCTCTTCACCCTGTTCAACCAGGAAGCCGAAGTCGAAACGCGCAACCTCCCCTCGTCCTCCGTAGTTCAGAAACCCGTCCTCGAGTCCGAAGAGGAAGACGACGACGAAGAAGATAACATTGTCGTTCACGACGTAACCGACATTAAAGTTTCCGAATCCCCTCAACCCCAACAAGCTAACGCAGAAAATAGAGTTTCAGAAATCATAGAAGAGGAATCAGAAACAGTACCCGAACCCGTAGAAGCTGACGTGGCAGACGAAGACGCTCTGAAGGCGATGAAGGACCACATGGATCTGGACTCGCAAACGAAGAAAACCTCTGGTCGCGACCTGAAAGGAAGCTTCTGGTCCGCGGCTTCGGTCTTCAGCAAGAAGCTTCAGAAGTGGAGGCAGAAGCAGAAGATGAAGAAGCGTGAGCGAAACGGCGTCGTTGTAGGCTCCGGCACTCTGCTCCCCGTCGAGAAGCCCATCGCCCGCCAATTCCGCGAAACGCAGTCGGAGATCGCCGACTACGGCTTTGGCCGCCGGTCCTGCGACACCGATCCACGGTTCTCGCTCGACGCGGCGCGAATGTCGTTCGATTTCGAGGAGCCGCGCGCGTCCTGGGACGGTTATTTAATGGCGAGGACTGCGCCGACTTTCGCGGTTCCTCCGAGGATGCCTACGATGATCGAAGACGTGCCGGCGCCGGTTCAGGTTCTCAGGACCGATTCCCTCATTCCCGTGGAGGAGCCTGAATATGAGGAGACTCTCACTCTTAATCTTAATCAAAATCTTAATCTTAGTGTTAATCATAATGCTAATGTTAATGCTAATCCTGATTTCCCTGGTGGTTCTACTCAGACGAGGGAGTATTATACGGACTCTTCCTCGCGGAGGAGGAAGAGTCTTGATAGGTCTAGTTCCATTAGAAGGACTGCTGCTGCTGTTGTTGCTGAAATGGATGAGTTGAAGAGTGTTTCGAATGCCAGTGCTACTACCAATGCTAAGGTTACTCCCGCTGCTTCTGCTGATTATGTTCACAATCCCTTGAGGGACTCCAATTTGAATTCGAATTCTTTGAGGGATGATGGTTGTGAGAAAGGGGCTTCTAAGAAGTCATCGAGCCGGTGGAGCAAGGCGTGGAGTATATGGGGATTGATTCACCGGAGAGGGAGTAAGGAGGAGGATGGTGGAGGGAATGGGAACGCCAATGGGAATGGCGTGGAGAGGTCGTTCTCTGAGTCATGGCAGGAGTATAGAGGTGGGGAGAGAAATGGGGATGTTAGAGGTGGTGGTTTTAATCCGAAGATGATGAGGAGTAATAGCAGTGTGAGTTGGAGGAATGGGCAGGGTTTAGGTGGTGGAGGGTTTGGGAGTGTGAGTATGAGGAAGAGTGATGTGCAGGGGAATGCGCTTGGGCTTGGGCTTGGTGGTGGTGGTGGTGGTGGAAGGAAAGGGAGGGATGAGTTTGTTGGGTTGGAGAGGAACCGGAGTGCAAGATACTCTCCAAACAACATCGATAACAATGGTCTCTTGAGGCTCTACTTGGGCGGCCGGAGAAATGGGTCCGGGAAAGGAAGGTCGAACCAGGCACATTCTATTGCCAGGAGCGTTCTCCGGCTGTATTGA 2010 0.5517 MNPTTTQPPPPSLPPPSLPPPPQLQPHRPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSSSSSAAARKPPSSSAAAAALKTIFRSSVAARRPPLSSLPELRRTKSFSASKNEALSGFFEPQRKSCDVRGRSTLFTLFNQEAEVETRNLPSSSVVQKPVLESEEEDDDEEDNIVVHDVTDIKVSESPQPQQANAENRVSEIIEEESETVPEPVEADVADEDALKAMKDHMDLDSQTKKTSGRDLKGSFWSAASVFSKKLQKWRQKQKMKKRERNGVVVGSGTLLPVEKPIARQFRETQSEIADYGFGRRSCDTDPRFSLDAARMSFDFEEPRASWDGYLMARTAPTFAVPPRMPTMIEDVPAPVQVLRTDSLIPVEEPEYEETLTLNLNQNLNLSVNHNANVNANPDFPGGSTQTREYYTDSSSRRRKSLDRSSSIRRTAAAVVAEMDELKSVSNASATTNAKVTPAASADYVHNPLRDSNLNSNSLRDDGCEKGASKKSSSRWSKAWSIWGLIHRRGSKEEDGGGNGNANGNGVERSFSESWQEYRGGERNGDVRGGGFNPKMMRSNSSVSWRNGQGLGGGGFGSVSMRKSDVQGNALGLGLGGGGGGGRKGRDEFVGLERNRSARYSPNNIDNNGLLRLYLGGRRNGSGKGRSNQAHSIARSVLRLY* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1112 669 MobiDBLite consensus disorder prediction 403 437 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 1 36 - -
Pvu8g1112 669 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 669 IPR008004 -
Pvu8g1112 669 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 669 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 147 171 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 518 566 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 476 490 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 1 27 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 403 419 - -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 469 500 - -
Pvu8g1112 669 Pfam Protein of unknown function (DUF740) 20 647 IPR008004 -
Pvu8g1112 669 MobiDBLite consensus disorder prediction 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1112 Pvu-Chr8 12470483 12472492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1112 - - pvu:PHAVU_008G107800g 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1112 8 12470483 12472492 Pvu8g1112 8 12470483 12472492 ECH
Pvu8g1112 8 12470483 12472492 Pvu10g0088 10 1290417 1292840 PCT