Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g1090 ATGGCACATGAGTTCCTTCCCATTGCAATTCTCATCATAAAAAGAGTTTTAACTTCTAACAAAATGTTTGATCACCGACTTCTCAAACCTTCCAAGATAGCTATATTCTGTCTCATCACTTTCTCAGCCATAATTTTTCTTATCCTTTGCGATGATCTTCTTTACCAGGATTCCCTACACCCTTCTGCAAGCAAAGGAGCACTAGAAGTGTTGCAAGCTCGAGCTCACAGAAATGGAGAGGGGATAAGGTCAACTCTTGTTCTCACACACACCCCTTTACGTTCCATGCAAGAGAATGAAGGAGTTGGTAGTAAAGGAAGTCAAGGAGTGCTTGTTGCTCCATTTAATTCCACTAAAGAAGAAAGAATTGCTTGGTTTAAAGGGAAGCTTCGCGAATTCAAGATTCTGAAGTCGGATGGATTGAGTAGGCAATTCCATGCTCGGGTTCTTGGATTTTTCAGCCATGAATGTGAGTCTCAATTTTTCATGACTTGGGAGTACCCTGCAGGCTCATTTGAAGCAAGAGAATTGTTGTCTATGGAGAGTCTTTTCAAGGTGCATCCCAAGGCTTGTTTGGTGATTCTATCAAGGACTTTGGACTCCACTCTTGGTTATAGGATCCTGAAGCCACTTCTTGATGGGAGGTTCAGAGTTCAGGCAATGACCCCAGACTTGCCATTTCTCTTCAAGGGGACTCCAGCTGAAGCATGGCTGAACGAGTTGATGAAAGGGGAGAAGGACCCTGGTGTGATTTCTCTGTTTCAGAACCTATCTAACTTGGTGAGACTTGCAGTTCTGTACAAATATGGTGGTGTGTACCTAGACACGGATTTTGTAGTCTTGAAACCATTATCTGGGTTGAGGAATTCTATTGGAGCACAAAGCATGGACTCTGGGAATAAGCACTGGACTAGACTAAACAATGCAGTCCTGATATTTGACATGAATCATCCACTTCTTCTTAGATTCATTAATGAATTTGTGTTAACTTTTAATGGGAACAAATGGGGGTACAATGGTCCCTACCTGGTTTCCAGAGTGGTTGAGAGACTGGGAGAAAGGCAAGGCTCCAACTTTACAATCTTGCCTCCTTTGGCCTTTTATCCAGCAGATTGGAAAAAGATTGGTGGTTTCTTTAGGAAGCCCAAAACTAGAGGTGAATCAGAATGGGTTGAAGCCAAACTGCTTCAGCTTAGTAAGGAGAACTATGGGGTTCATCTATGGAACAAAGAAAGTAGGAATTTGAAGATTGAAGAAGGAAGTGTCATAGCTAGACTGATATCTGATCGTTGTATCATTTGCAAGTATCTGTAA 1314 0.4209 MAHEFLPIAILIIKRVLTSNKMFDHRLLKPSKIAIFCLITFSAIIFLILCDDLLYQDSLHPSASKGALEVLQARAHRNGEGIRSTLVLTHTPLRSMQENEGVGSKGSQGVLVAPFNSTKEERIAWFKGKLREFKILKSDGLSRQFHARVLGFFSHECESQFFMTWEYPAGSFEARELLSMESLFKVHPKACLVILSRTLDSTLGYRILKPLLDGRFRVQAMTPDLPFLFKGTPAEAWLNELMKGEKDPGVISLFQNLSNLVRLAVLYKYGGVYLDTDFVVLKPLSGLRNSIGAQSMDSGNKHWTRLNNAVLIFDMNHPLLLRFINEFVLTFNGNKWGYNGPYLVSRVVERLGERQGSNFTILPPLAFYPADWKKIGGFFRKPKTRGESEWVEAKLLQLSKENYGVHLWNKESRNLKIEEGSVIARLISDRCIICKYL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g1090 437 Pfam Glycosyltransferase sugar-binding region containing DXD motif 175 295 IPR007577 -
Pvu8g1090 437 Pfam Alpha 1,4-glycosyltransferase conserved region 313 434 IPR007652 -
Pvu8g1090 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 130 434 IPR029044 -
Pvu8g1090 437 Gene3D - 214 361 - -
Pvu8g1090 437 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 22 436 IPR044789 -
Pvu8g1090 437 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 22 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g1090 Pvu-Chr8 12077733 12079243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g1090 111 434 Glycosyltransferase AT2G38150 55.692 8.14e-134 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g1090 K01988 - gmx:100812965 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1090 8 12077733 12079243 Pvu8g1090 8 12077733 12079243 ECH
Pvu8g1090 8 12077733 12079243 Pvu10g0033 10 635519 636633 PCT