Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0993 ATGAGAATCCATCAAATCTTCTCCCATATCTTCATACCCCTGTGCATGATATTCTTGAATATCATCATCAACGTAGCAACGTGCCACAGTCTTGATCATCAACAATTCTTATTACTTCACTTGAAAGAAAGCCTGGTATTCAACCCAGCCACATCCAAAAAATTGGTCTACTGGAACCAAAGCAGCGATTGCTGTCAATGGAATGGAGTAACATGCAGCATGGGCGGTGTAATTGGTCTTGACTTGAGTGAGGAGTTTATTTTTGGAGGACTTGATAATTCCAGCCTCTTTGAACTGGAATATTTGCAGAGGTTGAATCTGGCTTACAATGATTTCAATTCTTCCATTCCTTTGAAGTTCGGCAAGCTAAAAAGTTTGAGGTATTTGAATTTATCAAATGCTGGATTTCATGGCCAGATTCCAAGTGAGATTTCTCTTCTGACAAATTTGACAACACTTGACTTGTCAACACCACTTACCTCACAACATATTCTCAAACTCCAGAATCCAAATCTTGCAATGTTTTTGCAGAATCTTGAAAAAATCACAGAACTATACCTTGATGGTGTAAAGGTATCTGCCGAGGGAAGGGAGTGGTGTCATGCTCTATCTTCTCTTCAAAAACTTGAAGTGTTGAGCCTGTCATCATGCAATATCTCTGGACCAATTGATTCTTCACTAGCAACACTCGTGAAGCTCTCAGTAATTAGACTGAGTCTGAATAACATCTCAAGTTCGGTGCCAAAATTCTTTGCAAATTTCTCCAATTTGAATGTCTTAGAGATTAGCAGTTGTTCGTTGAGAGGTCATTTTCCAAACGGCATCTTTCTACTACAAGCTCTAAAGGTTCTTGATATATCAAACAACAGGGATCTTCATGGAGTTTTGCCAAACTTCTTACCAGATGCTGTTCTTCACACCATGAATCTTAGTAATACAAACTTCTCTGGTAAGTTACCAGGGGCTATTTCAAATCTGAAGCAGTTGTCTTTGTTAGATGCATCTAACTGCCAACTTATTGACACTCTCCCAATTTCCTTGTCAGAACTCACTCAACTTGTTCATTTGGACTTGTCTTTAAATAGGTTTACTGGTCCCCTTCCCTCTTTCAAGATGGTAAAAAATCTCAGATATTTATCAATCTTCCACAATAATCTGACAGGAGTCATCACTACAACTCATTTTGAGGGACTTGAAAATCTCCTCAGTATTAATTTAGGAGATAATTACCTTAATGGAAACATTCCCATGTCTCTTTTTACACTTCTATCTTTGCAAGAGCTTACACTTTCTCATAATCGACTTGATGGTCTATTAGATGAATTTGTAAATGCTTCTTCCTCAAAATTAGAGTTGATTGACTTGAGCAACAATATATTGCATGGTCCTATTCCGGTGTCTATCTTTCATATCAAAGGACTTCGTTTCCTACAACTTTCTCACAATAAATTCAATGGCACCATGCGGCTGGATATGGTTCAAAGGCTTCAAAATTTGCATACATTAGGTCTTTCACACAACAAATTATCAGTTGATGTAACTCTTGACGATCATGACATTTCATCCTTTCCCAGCATGAAATATTTACTTTTGGGTTCTTGCAATTTAGGAGAATTTCCGGGGTTCTTGAGAAACCAATCCCAAATAAATGCTTTAGACCTATCCAACAACCAGATTAAAGGAAAAATACCTAACTGGATCTGGAGATTTAACTATCTGGTTTATTTAAATCTTTCCAACAATTTTCTCACAAATATGGAAGGACCCTTTGATGATCTGAATTCCAATCTATACATCCTTGATCTTCATTCCAATGAACTTACTGGATCACTTCCCATTTTCACAAAATATGCGGCCCATTTGGACTACTCAAACAATAAATTCAGCAGTGCCCCACTCGACATGTATAAGTATGTTCCTTTTCTATACTTTCTCTCCCTTTCAAAGAACAACTTTCAAGGAAAAATCCCCGAATCCTTTTGTAATTTCTCTTCTCTCCGGTTGCTTGATCTTTCTTATAATAGCTTCAATGACCTCATCCCCAAGTGCTTGATGAGAAGGAATAGTACCCTCCGAGTACTAAATCTTGCTGAAAACAAACTCAGGGGTTATGTTTCTGACACAATTTCAAGTTCATGCAGTTTACGATTCCTCAATCTCAATGGAAATCTCTTGGAAGGTGTTATCCCAAACACTCTTGCAAATTGCAAGAGTCTACAAGTCTTAAATCTTGGAAACAATTTGTTCCAAGATAGACTTCCGTGTTTCTTAAGAAGGATTTCCACCCTGCGAGTGCTAATTTTGAGGTCAAACAAACTCAATGGTCCTATTGCATGCCCACGTAGCACTAGCAATTGGGAGAAGCTTCACATTATTGATCTAGCCTCCAATAATTTCAATGGTATTCTACCTGGACCAGTTTTGAGAAGCTTTAAACAAATGAAGCAATGTGAGGCAGAATCACGTGAGAAGTACGGGAGTCTATTTTTTGACATGTTTGATAATGTTGACACTGTGAGTCTCTCCAGTTTGTTGTCATTTTTCAACAAATTTCTAGTAATAAAATTGCACAAATTGTTGGAAACTGAACCTTATAATGTGGTTGACCACATATTGTCTTATTATGCCATTTCCAACGAATATGGTTGTCGCTACTTGGACTCAGTTACAGTTGTGAACAAGGCTTTGCAAATGAAGTTTAACAAAATTCCCACCATCTTCACTTCCTTGGATCTCTCCTCCAACCATTTTGAAGGTCCAATACCTGAAGAACTTGTGAGTTTGAGAGCACTGATTGTTCTTAACCTGTCACATAATACTCTGTCAAGCCATATCCCCTCATCAATTGGAAATTTGATGAATGTAGAATCCTTGGACTTGTCAAATAATAGTTTGAGCGGTGAAATCCCTCCTGAGCTTGCTAGTCTAAACTTTCTAGAATGTTTGAATCTTTCATTTAACCGTTTGTGGGGGGAAATTCCCACAGGTGCTCAAATGCAAACATTTAGTTCAAGTTCTTTTGAAGGCAATGAAGGATTATGTGGGCCACCGCTAGAAGATTGCACCAATGATAGAAGGGGACACTCATCTCCAACACCAGTACATGAAATGTATGAATCAACTGACTGGAATTTCTTAAGTGTAGAACTTGGATTTATCTTTGGCTTTGGAATTGTTATCCTGCCCCTTATTTTGTTTGAGTGTTGGAGGCTTTTGTATTGGAAGCATGTCGATGATCTGCTTTACAAGCTTGTTCCTCAACTGGGTTTTTCTTATGAACACCATAGAGGACAAAGGTACAGATCTCTGAGGTGGATTGGATAG 3324 0.3806 MRIHQIFSHIFIPLCMIFLNIIINVATCHSLDHQQFLLLHLKESLVFNPATSKKLVYWNQSSDCCQWNGVTCSMGGVIGLDLSEEFIFGGLDNSSLFELEYLQRLNLAYNDFNSSIPLKFGKLKSLRYLNLSNAGFHGQIPSEISLLTNLTTLDLSTPLTSQHILKLQNPNLAMFLQNLEKITELYLDGVKVSAEGREWCHALSSLQKLEVLSLSSCNISGPIDSSLATLVKLSVIRLSLNNISSSVPKFFANFSNLNVLEISSCSLRGHFPNGIFLLQALKVLDISNNRDLHGVLPNFLPDAVLHTMNLSNTNFSGKLPGAISNLKQLSLLDASNCQLIDTLPISLSELTQLVHLDLSLNRFTGPLPSFKMVKNLRYLSIFHNNLTGVITTTHFEGLENLLSINLGDNYLNGNIPMSLFTLLSLQELTLSHNRLDGLLDEFVNASSSKLELIDLSNNILHGPIPVSIFHIKGLRFLQLSHNKFNGTMRLDMVQRLQNLHTLGLSHNKLSVDVTLDDHDISSFPSMKYLLLGSCNLGEFPGFLRNQSQINALDLSNNQIKGKIPNWIWRFNYLVYLNLSNNFLTNMEGPFDDLNSNLYILDLHSNELTGSLPIFTKYAAHLDYSNNKFSSAPLDMYKYVPFLYFLSLSKNNFQGKIPESFCNFSSLRLLDLSYNSFNDLIPKCLMRRNSTLRVLNLAENKLRGYVSDTISSSCSLRFLNLNGNLLEGVIPNTLANCKSLQVLNLGNNLFQDRLPCFLRRISTLRVLILRSNKLNGPIACPRSTSNWEKLHIIDLASNNFNGILPGPVLRSFKQMKQCEAESREKYGSLFFDMFDNVDTVSLSSLLSFFNKFLVIKLHKLLETEPYNVVDHILSYYAISNEYGCRYLDSVTVVNKALQMKFNKIPTIFTSLDLSSNHFEGPIPEELVSLRALIVLNLSHNTLSSHIPSSIGNLMNVESLDLSNNSLSGEIPPELASLNFLECLNLSFNRLWGEIPTGAQMQTFSSSSFEGNEGLCGPPLEDCTNDRRGHSSPTPVHEMYESTDWNFLSVELGFIFGFGIVILPLILFECWRLLYWKHVDDLLYKLVPQLGFSYEHHRGQRYRSLRWIG* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0993 1107 Pfam Leucine Rich Repeat 714 736 IPR001611 GO:0005515
Pvu8g0993 1107 Pfam Leucine Rich Repeat 665 684 IPR001611 GO:0005515
Pvu8g0993 1107 PANTHER LEUCINE-RICH REPEAT-CONTAINING, PLANT-TYPE, LEUCINE-RICH REPEAT DOMAIN, L-RELATED 1 1091 - -
Pvu8g0993 1107 SUPERFAMILY L domain-like 620 1008 - -
Pvu8g0993 1107 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Pvu8g0993 1107 Gene3D Ribonuclease Inhibitor 33 146 IPR032675 -
Pvu8g0993 1107 Gene3D Ribonuclease Inhibitor 880 1025 IPR032675 -
Pvu8g0993 1107 Gene3D Ribonuclease Inhibitor 588 857 IPR032675 -
Pvu8g0993 1107 Gene3D Ribonuclease Inhibitor 157 488 IPR032675 -
Pvu8g0993 1107 Pfam Leucine rich repeat 375 435 IPR001611 GO:0005515
Pvu8g0993 1107 Pfam Leucine rich repeat 908 965 IPR001611 GO:0005515
Pvu8g0993 1107 Gene3D Ribonuclease Inhibitor 489 587 IPR032675 -
Pvu8g0993 1107 SUPERFAMILY L domain-like 37 298 - -
Pvu8g0993 1107 SUPERFAMILY L domain-like 271 612 - -
Pvu8g0993 1107 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 1 1091 - -
Pvu8g0993 1107 SMART LRR_typ_2 496 522 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 928 952 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 713 735 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 663 686 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 123 147 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 350 372 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 976 999 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 230 253 IPR003591 -
Pvu8g0993 1107 SMART LRR_typ_2 422 444 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0993 Pvu-Chr8 10079992 10083315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0993 28 1060 Receptor kinase-like Gene Family AT1G47890 33.271 4.55e-125 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0993 - - var:108320385 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0993 8 10079992 10083315 Pvu10g0140 10 2148432 2151749 PCT