Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0973 AACAATTTCAATTTTATTTCATCAGATGTTGGTACTCGTATGTCTCGCATAATTTTCTTGTCTCTGTCCAAAAATAATTTATCCGGGAGTATTCCTCAATTCCTGTGCAATAGTTCAAGTCTGCTAGTTCTGGATGTTTCTTATAATAACTTCGATCGGAAAATTCCAGAGTGCTTAACACAGAGTGAGACACTTGTGGTATTAAATCTTCAACATAACAAGTTTAAAGGCAGCATTCCAGATAAATTTCCAGTACCTTGTGCTCTAAAAACTCTGGATCTGAATAGCAATCAATTGCAAGGCCCAATTCCCAAATCTATTGCAAATTGCACATCATTAGAGGTGTTGGATCTTGGAAACAATGAGGTAGATGATGGATTTCCATTCTTCTTAAATATAATATCCAGACTCCGCGTCCTTGTTTTGAGGAGAAACAAATTTCATGGTCACATTGCATGTCCTCGTACCAGTGATTTTTGGGATATGCTTCAAATTGTTGATGTGGCTTTCAACAATTTCAGTGGCTTACTTCCAGCAAAATGCTTGAAAACCTGGAAAGCAATGATGCTTGATGAAGATCGTGTATCCAAATTCAGTCCCATAGAATCTAAGATCCTTACATTTGATGGTATATATTATCATGATTCTGTGACACTTACAGTCAAAGGTTTGCAGTTAGAGTTTGTCAAAGTCCTGAATCTCGTCACATCTGTTGACTTCTCATCCAACAATTTTGAAGGAACAATACCTGAAGAGCTCATGGATTTTACTAGACTTTATGCTCTCAACTTGTCTCACAATGGTTTAACAGGCCAAATCCCTTCATCTATAGGGAATTTAAAACAGCTTGAGTCATTGGACCTGTCAAGCAACAATCTTGGTGGTGAAATTCCCACACAATTTGAACGTTTAAATTTCCTCTCATACCTGAACCTTTCCTTTAACCGTCTGGTGGGAAAAATCCCTGTAGGTAGGCAAATTCAAACATTTGACGCATCTTCCTATGTTGGTAATGCAGACTTATGTGGAATTCCTTTGAATATGTGTCCTGATCAGCGCAATTCAAAATCTGAAGTACATACAGATTCTGGTGCTAAATTTGACTGGACTTTTGTATCAATTGGAGTTGGTTTTGGGGTTGGAGCAGGAATGGTCGTGGCTCCATCATTGTTTTTGGAGAGCCTGAAAAAATGGAGCAACCATATAATCGATAAAGCTCTCCTAGTTATTCTTCCAATGCTTGGTTTGACTTGGATACCTATTCATGATGACGATGACGAAGATACAGAGGAAGAGACTAAGAAAAATAACTCAGATATGGAAGAGTATTGTGATTACAATGAGATACAAGATAACTTGGTCCATCAAAGGTTTCGAGGGAGGTACTGTGTCTTGTGTTCCAAGCTTCATATCAGTAACAAGAAGGTAATTCATGATCCAAGGTGTACATGTTTCCCATCACCTCCCATTTCAACATCAACTTATCCAGATTCATATTCTTCTCATTCACACTAA 1515 0.3782 NNFNFISSDVGTRMSRIIFLSLSKNNLSGSIPQFLCNSSSLLVLDVSYNNFDRKIPECLTQSETLVVLNLQHNKFKGSIPDKFPVPCALKTLDLNSNQLQGPIPKSIANCTSLEVLDLGNNEVDDGFPFFLNIISRLRVLVLRRNKFHGHIACPRTSDFWDMLQIVDVAFNNFSGLLPAKCLKTWKAMMLDEDRVSKFSPIESKILTFDGIYYHDSVTLTVKGLQLEFVKVLNLVTSVDFSSNNFEGTIPEELMDFTRLYALNLSHNGLTGQIPSSIGNLKQLESLDLSSNNLGGEIPTQFERLNFLSYLNLSFNRLVGKIPVGRQIQTFDASSYVGNADLCGIPLNMCPDQRNSKSEVHTDSGAKFDWTFVSIGVGFGVGAGMVVAPSLFLESLKKWSNHIIDKALLVILPMLGLTWIPIHDDDDEDTEEETKKNNSDMEEYCDYNEIQDNLVHQRFRGRYCVLCSKLHISNKKVIHDPRCTCFPSPPISTSTYPDSYSSHSH* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0973 504 PANTHER LRR RECEPTOR-LIKE KINASE 1 417 - -
Pvu8g0973 504 Gene3D Ribonuclease Inhibitor 1 358 IPR032675 -
Pvu8g0973 504 SUPERFAMILY L domain-like 4 336 - -
Pvu8g0973 504 PANTHER RECEPTOR-LIKE PROTEIN 12 1 417 - -
Pvu8g0973 504 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Pvu8g0973 504 Pfam Leucine rich repeat 64 122 IPR001611 GO:0005515
Pvu8g0973 504 PRINTS Leucine-rich repeat signature 89 102 - -
Pvu8g0973 504 PRINTS Leucine-rich repeat signature 280 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0973 Pvu-Chr8 9849583 9851098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0973 2 398 Receptor kinase-like Gene Family AT3G05660 39.609 8.38e-87 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0973 - - pvu:PHAVU_008G0953001 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g0761 10 21918263 21923032 Pvu8g0973 8 9849583 9851098 PCT