Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0970 TTAGAAGGATCTGTGCAGAACACTAGTTCCTATCTGAGCCTCATTGACCTTCATGCTAACAAACTCCAAGGGAAGCTACAAATATTTCCAGTGAAAGTCACTTATTTGGACTATTCAAGCAACAATTTCAATTTTATTTCATCAGATGTTGGTAGTCGTATGTATCGCATAATTTTCTTGTCTCTGTCCAAAAATAACTTATCCGGGAGTATTCCTCAATTCCTGTGCAATAGTTCAAGTCTGCTAGTTCTGGATGTTTCTTATAATAACTTCGATGGGATAATTCCAGGGTGCTTGACTCAGAGTGAGACACTTGTGGTATTAAATCTTAAACATAACAAGTTTAAAGGCAGCATTCCAGATAAATTTCCAGTACCTTGTGCTCTAAAAACTCTGGATCTGAATAGCAATCAATTGCAAGGCCCAATTCCCAAATCTATTGCACATTGCACATCATTAGAGGTGTTGGATCTTGGAAACAATGAGTGGCTTACTTCCAGCAAAATGCTTGAAACCTGGAAAGCAATGATGCTTGATGAAGATCGTGTATCCAAATTCAGTCCCATAGAATCTAAGATCCTTACATTTGATGGTATATATTATCATGATTCTGTGACACTTACAGTCAAAGGTTTGCAGTTAGAGTTTGTCAAAGTCCTGAATCTCGTCACATCTGTTGACTTCTCATCCAACAATTTTGAAGGAACAATACCTGAAGAGCTCATGGATTTTACTAGACTTTATGCTCTCAACTTGTCTCACAATGGTTTAACAGGCCAAATCCCTTCATCTATAGGGAATTTAAAACAGCTTGAGTCATTGGACCTGTCAAGCAACAATCTTGGTGGTGAAATTCCCACACAATTTGAACGTTTAAATTTCCTCTCATACCTGAACCTTTCCTTTAACCGTCTGGTGGGAAAAATCCCTATAGGTACGCAACTTCAAACATTTGACGCATCTTCGTATGTTGGTAATGCATATTTATGTGGAAGTCCTTTGAAATTGTGTCCTGATCGGCGCAATTCAAAATCCGAAGTATATACAGATTCTGGTGTTCAATTGGACTGGACTTTTGTATCAATGGGGGTGGGTTTTGGGATTGGAGTGGGTTTTGGCGTTGGAGCAGGAATGGTCGTGGATCCATCATTGTTTTTGGAGAGACTGAAAAAATGGAGCAACCATATAATCAATAAAGCTCTCCTCGTTGTTCTTCCAGTGCTTGGTTTGACTTGGATACCCAGATGA 1248 0.3894 LEGSVQNTSSYLSLIDLHANKLQGKLQIFPVKVTYLDYSSNNFNFISSDVGSRMYRIIFLSLSKNNLSGSIPQFLCNSSSLLVLDVSYNNFDGIIPGCLTQSETLVVLNLKHNKFKGSIPDKFPVPCALKTLDLNSNQLQGPIPKSIAHCTSLEVLDLGNNEWLTSSKMLETWKAMMLDEDRVSKFSPIESKILTFDGIYYHDSVTLTVKGLQLEFVKVLNLVTSVDFSSNNFEGTIPEELMDFTRLYALNLSHNGLTGQIPSSIGNLKQLESLDLSSNNLGGEIPTQFERLNFLSYLNLSFNRLVGKIPIGTQLQTFDASSYVGNAYLCGSPLKLCPDRRNSKSEVYTDSGVQLDWTFVSMGVGFGIGVGFGVGAGMVVDPSLFLERLKKWSNHIINKALLVVLPVLGLTWIPR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0970 415 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Pvu8g0970 415 Pfam Leucine rich repeat 104 161 IPR001611 GO:0005515
Pvu8g0970 415 PANTHER LRR RECEPTOR-LIKE KINASE 166 410 - -
Pvu8g0970 415 PANTHER LRR RECEPTOR-LIKE KINASE 9 162 - -
Pvu8g0970 415 SUPERFAMILY L domain-like 17 336 - -
Pvu8g0970 415 PRINTS Leucine-rich repeat signature 129 142 - -
Pvu8g0970 415 PRINTS Leucine-rich repeat signature 268 281 - -
Pvu8g0970 415 Gene3D Ribonuclease Inhibitor 1 346 IPR032675 -
Pvu8g0970 415 PANTHER RECEPTOR-LIKE PROTEIN 12 166 410 - -
Pvu8g0970 415 PANTHER RECEPTOR-LIKE PROTEIN 12 9 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0970 Pvu-Chr8 9829872 9831275 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0970 5 380 Receptor kinase-like Gene Family AT3G05660 34.873 2.37e-69 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0970 - - pvu:PHAVU_008G0953001 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0970 8 9829872 9831275 Pvu10g0761 10 21918263 21923032 PCT