Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu8g0943 | ATGCCGTGCCTCAACCTCTCCACCAACGTTAACCTCGACGGCGTCGATACCTCTTCCATTCTCACCGAAGCCACCTCAACCGTCGCCAGCATCATTGGCAAACCCGAAGCCTATGTGATGATTGTATTGAAAGGATCAGTACCTATATCTTTTGGCGGGAATGAGCAGCCAGCGGCTTATGGTGAATTGGTGTCCATTGGTGGTCTGAGCCCTGATGTGAACAAGAAACTTAGTGCCGCCATTGCTTCAGTTCTTGAAACCAAGTTGTCTGTGCCAAAGTCGCGATTCTTCTTGAAGTTTTACGACACTAAGGGTTCCAACTTTGGATGGAATGGAACTACATTCTGA | 348 | 0.4828 | MPCLNLSTNVNLDGVDTSSILTEATSTVASIIGKPEAYVMIVLKGSVPISFGGNEQPAAYGELVSIGGLSPDVNKKLSAAIASVLETKLSVPKSRFFLKFYDTKGSNFGWNGTTF* | 116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu8g0943 | 115 | Pfam | Macrophage migration inhibitory factor (MIF) | 2 | 115 | IPR001398 | - | |
| Pvu8g0943 | 115 | PANTHER | D-DOPACHROME DECARBOXYLASE | 1 | 115 | IPR001398 | - | |
| Pvu8g0943 | 115 | Gene3D | Macrophage Migration Inhibitory Factor | 2 | 115 | IPR014347 | - | |
| Pvu8g0943 | 115 | SUPERFAMILY | Tautomerase/MIF | 1 | 115 | IPR014347 | - | |
| Pvu8g0943 | 115 | PANTHER | TAUTOMERASE/MIF SUPERFAMILY PROTEIN | 1 | 115 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu8g0943 | Pvu-Chr8 | 9452245 | 9454602 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu8g0943 | K07253 | - | gmx:100306618 | 215.312 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu8g0943 | 8 | 9452245 | 9454602 | Pvu8g0943 | 8 | 9452245 | 9454602 | ECH | |
| Pvu8g0943 | 8 | 9452245 | 9454602 | Pvu10g0665 | 10 | 12052256 | 12055594 | PCT |