Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0934 ATGTTCACCCAATTTTTCATCTTCTTTCTCCTCTTCACTCCCATCATCTCCACCACACCACATGAAACCCATGATTTCGTCCGTACCTTAGACCGCAAAATGTCGGGGTTGGACGAAAACCAAGAAAAGTTCAGCCGTTTCAGGTTCTATTGGCACGACGTGGTGAGTGGACGCAACCCTTCTTCCATAGAAGTAGTTTCATCAGGGAAGAACTCAACGACGTCGTTCGGATCGGTGAACATGATAGAGAACCCTTTGACATTGGAACCCCAATTGAACTCTCAGTTGGTGGGGATGGCGCAGGGGTTCTATGCTTCGACGTCCCAGAGTGAGGTTACCTTGCTGATGGCTATGAACTTTGCCATCACTGAAGGGAAGTATAATGGTAGCAGCATCACCATTCTGGGAAGAAACCCTGTGTTCAACAAGAAGAGGGAGATGCCTGTGATTGGTGGAAGTGGCCTCTTTCGATTTGCTAGGGGTTATGCTCAGCTTAGGACTCACTGGTTCTCACCCTCCACTAGGGATGCCATTGTTGAGTACACTGTTTATGTTTTGCATTATTAA 567 0.4727 MFTQFFIFFLLFTPIISTTPHETHDFVRTLDRKMSGLDENQEKFSRFRFYWHDVVSGRNPSSIEVVSSGKNSTTSFGSVNMIENPLTLEPQLNSQLVGMAQGFYASTSQSEVTLLMAMNFAITEGKYNGSSITILGRNPVFNKKREMPVIGGSGLFRFARGYAQLRTHWFSPSTRDAIVEYTVYVLHY* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0934 188 PANTHER NUCLEOPORIN-RELATED 1 187 IPR004265 -
Pvu8g0934 188 Gene3D - 32 184 IPR044859 -
Pvu8g0934 188 PANTHER DIRIGENT PROTEIN 1 187 - -
Pvu8g0934 188 Pfam Dirigent-like protein 46 185 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0934 Pvu-Chr8 9327175 9328350 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0934 - - gmx:100796078 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0934 8 9327175 9328350 Pvu10g0660 10 11609222 11609791 PCT
Pvu10g0662 10 11785924 11786860 Pvu8g0934 8 9327175 9328350 PCT