Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0921 CACGATGACCAGACATGCATCATTGCCATCATCGCTACATGCATTGGTGTGGCAGCTATGATTGCCTTTCTTCGTTATACTCCACACTTCAACGGATGCCATCACGCCACGTCATCTCCGCTACTACTCTCGCGCGCGTCATCTGCTGCTACTCTGTTCCCCGAAGCTTCGATAACTTCCATAACGATTTTACCAACATTGCCACCTTACATAAGCAAACACAAAACAACGTTATTTTTCTTTCACTTCAATTCCTTCAAATCTCAATCCAAAACCAAACACAAAATGACAAATCTCGACGGAAATTCGTCGCCAAAGATACATGTTCAGACTCCGCCAGTGGAGCCTTCAGCGCCGCCCAGCGTGAACCACCGGACGTCGGCCACTAACAGCGGTGGAATAGGCGGAATCCTGCGGCGGTTGGAGAGGGAGGACTTGATGAAGAGAGGGTCGTTGGCACTGAGAGGGATCGCTCTGCTTTTCTCTCTGATTTCATTCATTGTCATGGCCAGCAATAAACACGGCGATTGGAGAGATTTTGATAAATTTGAAGAGTACAGGTATTTGCTAGCTATAGCGATTTTGTCTAGTTTGTACACTGGAGGCCAAGCGTTCCGTCAAATTCATGAACTTTCCACTGCAAAACAATTGCTTAAGCCAAGAATGGCAGCTATGCTTGACTTTTTTGGTGATCAGATTATTGCATATCTTTTGATATCATCGGCATCTTCTGCAATTCCATTGACAAATAGAATGAGGGAAGGAGCAGACAATATATTTACAGACACTTCAGCTTCAGCCATTAGCATGTCTATTTTTGCCTTCTTGTGTGTAGCAGCTTCAGCCCTTATTTCTGGCTACAAACTATCAACTCAACCTTACATCTGA 888 0.4482 HDDQTCIIAIIATCIGVAAMIAFLRYTPHFNGCHHATSSPLLLSRASSAATLFPEASITSITILPTLPPYISKHKTTLFFFHFNSFKSQSKTKHKMTNLDGNSSPKIHVQTPPVEPSAPPSVNHRTSATNSGGIGGILRRLEREDLMKRGSLALRGIALLFSLISFIVMASNKHGDWRDFDKFEEYRYLLAIAILSSLYTGGQAFRQIHELSTAKQLLKPRMAAMLDFFGDQIIAYLLISSASSAIPLTNRMREGADNIFTDTSASAISMSIFAFLCVAASALISGYKLSTQPYI* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0921 295 Pfam Casparian strip membrane protein domain 147 277 IPR006702 -
Pvu8g0921 295 PANTHER CASP-LIKE PROTEIN 4B1 116 294 - -
Pvu8g0921 295 MobiDBLite consensus disorder prediction 94 131 - -
Pvu8g0921 295 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 116 294 - -
Pvu8g0921 295 MobiDBLite consensus disorder prediction 94 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0921 Pvu-Chr8 9201703 9204269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0921 129 255 Miscellaneous Gene Families AT1G79780 24.638 3.40e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0921 - - pvu:PHAVU_008G090400g 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0921 8 9201703 9204269 Pvu8g0921 8 9201703 9204269 ECH
Pvu8g0921 8 9201703 9204269 Pvu10g0650 10 11262488 11264195 PCT