Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0916 ATGATTGTGATGTCTGAGAAACCCCTTCCGCCAGTTCCTCCACAGGTTTCAGACACCACCTTTTGTCCTTCTTCAAAGAGGTTGGAAGGAAAAATTGCTATTGTAACTGGGGGTGCTAGGGGAATAGGTGAAGCAACTGTGAGAGTTTTCGTGAAGCATGGTGCAAAGGTGGTGATTGCTGATGTTGAGGATGCAGCTGGAGCCATGCTTGCTGAGACACTGTCTCCCTCAGCAAGCTATGTCCACTGTGATGTTAGGTTGGAGAAAGAGGTTGAGAACTTGGTTAGTTCCACAATTTCTCGCTATGGACATCTTGACATCATGTTCAACAATGCTGGGGTGCTAGGGAACCAGTCCAAGAACAAGAGCATTGTGAACTTTGATCCTGATGAGTTTAACAGGGTCATGTGTGTGAATGTGAAGGGAGTGGCTTTGGGGATGAAGCATGCTGCAAGGGTGATGATTCCAAGAGGAGTAGGGTGCATTATCTCAACTACTAGTGTGGCAGGGCTCATGGGGGGGCTTGGACCACATGCTTACACAGCCTCAAAGCATGCCATAGTTGGGCTTACAAAGAACACTTCTTGTGAGTTGGGGAAGTATGGGATAAGGGTGAATTGCATTTCACCATTTGGGGTGGCTACTTCCATGCTTGTGAATGCATGGAGGTCTTGTGATGATGAAGAGGCTGATCATGAGGGCATCAATTTTGGGGTGCCTTTCCCAGAGGAAGTGGAGAAAATGGAGGAGTTTGTCAGAGGTCTTGCCAACTTGAGAGGAACAACTTTGAGGGCCGTGGACATTGCTGAGGCTGCACTCTATCTTGCTAGTGACGAATCCAAGTATGTGAGTGGCCACAATCTTGTTGTGGATGGTGGAGTCACTTCCTCAAGAAATTGTATTGGATTGTAA 912 0.4737 MIVMSEKPLPPVPPQVSDTTFCPSSKRLEGKIAIVTGGARGIGEATVRVFVKHGAKVVIADVEDAAGAMLAETLSPSASYVHCDVRLEKEVENLVSSTISRYGHLDIMFNNAGVLGNQSKNKSIVNFDPDEFNRVMCVNVKGVALGMKHAARVMIPRGVGCIISTTSVAGLMGGLGPHAYTASKHAIVGLTKNTSCELGKYGIRVNCISPFGVATSMLVNAWRSCDDEEADHEGINFGVPFPEEVEKMEEFVRGLANLRGTTLRAVDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCIGL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0916 303 Gene3D - 20 301 - -
Pvu8g0916 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 295 IPR036291 -
Pvu8g0916 303 CDD secoisolariciresinol-DH_like_SDR_c 27 295 IPR045309 GO:0016616
Pvu8g0916 303 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 18 303 - -
Pvu8g0916 303 Pfam Enoyl-(Acyl carrier protein) reductase 37 295 - -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 32 49 IPR002347 -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 103 114 IPR002347 -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 180 199 IPR002347 -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 201 218 IPR002347 -
Pvu8g0916 303 PRINTS Glucose/ribitol dehydrogenase family signature 258 278 IPR002347 -
Pvu8g0916 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 103 114 IPR002347 -
Pvu8g0916 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Pvu8g0916 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 IPR002347 -
Pvu8g0916 303 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 2A-LIKE 18 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0916 Pvu-Chr8 9158077 9159528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0916 5 294 Acyl Lipid Metabolism Gene Families AT1G24360 24.917 5.45e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0916 - - gmx:100775210 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0916 8 9158077 9159528 Pvu8g0916 8 9158077 9159528 ECH
Pvu8g0916 8 9158077 9159528 Pvu10g0817 10 27669830 27675250 PCT
Pvu10g0641 10 10625720 10627320 Pvu8g0916 8 9158077 9159528 PCT