Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0876 ATGGGGAAGAGAAAAGAGCGTCGCCTCGCTGCTCTCAGCAACACCGGTCGCCGACTCAAACTCGATCTTTTTGCGGAACCCTCTGGAGAGTTGGGTGGCTCCACTCTACATGGTGATGCTGGAGGAGATACTGATTCTCAACATCGTGATGGGTTACCCAATTCACCCTCGTCTTCAGGTCAAGAATCACAGAATCCCTTGCTGTTACTTGGGCAATATAGTGATGATGAAGGGGACGACCGATCAAGCAGAGGGCTTAATGATGTGAATTTGCAAAGCCCTGTGCTCAATGAAGAGGGTAAGGGTGAACTTGATGATGGATCCAAAGATTTGAATATCAGTGTCTCTGCAGATCTTGTTCCTCACAATAATGAACAGCAAAATGCGATGCCAAATTCTACTTCACTTGATGTTGGATCCTGTGGAAGAAATGAAAGTCATGGTGTTACTGAAAATTTAGAAAACGGAATGGTATCCAAAGATCAAATATATGTTTCTGAAAGTTTTGATGAAAGAGTTGTCACTGATGTTGGTTTGGGGTGGAAGATTGTGATGCACGAGGAAAGCCAAAGCTATTATTACTGGAACACTGAAACCGGTGAAACGTCATGGGAAGTGCCCCAGGTCTTGGCTCCTGCAGATCAGTTGCCTCATGCTTCTGTCAATGATAAAACAGAGGGTGCTGCTGTTGGTGATAGTTCCAGTGTGCCCTCTACTGGGATGCTGGACACTTCTGCTGCTTTCACTACTGATACTTCTTTGGATGCTACAAGGACTTCTCATAAAGAGTTGTGTGGTCATGGGTCCCAGATGAATGGAGGTAGTGTTGAATGTAGAAGTCAAAATCAGGGTTCTGATGATAATGGTAATGAGTTGACAAGAGATGATGGTCATATGAGTATTTCCGAAGATCAACATCATTCATCTGTTTCCAAGTCTAGTATTGAAGAACAGCAAGCGGACATTGATTTTCCTTCTCGACTTGTGAATCAGTGTGAGAGTTTGTTAGAGAGGTTGCAATCACTGAAAAAGTCAAAGGAAAATCTGCAAGGCCAGGAATTCTTGTCAAAGTACATGCTAGAGATTGAGATTAGGCTCTCTGATATTAGGTGTCTTGCTTCATATGGATCATCTCTGCTTCCTTTCTGGATGCATTCTGACAGAAAGATAAATTTGCTTGAAAGTTTAATCAACGATGATTTGCTTGAAACTGGCAAGTCTTCACATGATGAAGTTGAGGATAAACATGTCCCTGTCTCTGAAGAATTGGGTGACCAACTGAATGGTATGGAACATGAGTCTGAGGTAGATCAAAATAATAACAAAGGGAGTCTTCTTACTTCTGATGCTTCTAATGGATCTCAGGTTGATGCTTTGGCTGTAGTTGTAAAAGATATCAACAATAATTTGTTTACCAATGGTCAGCATGTTCCATCGTCTAGTTCTCCTGGTAGTCATATGGAATCATATGTAGAGATTAATTCAAAAGCTGAAGCAGTTATAAATCCTCAAGAACCAATTCATAAACATGGGTATGTATCTAGTGAAGATGTTGATATGGATGTTGATATGGAAGTCGAAGATATGAATTCCTCAGACAATACTACTGTCATAGATGTGCCTGTTGCAAAGGATTCTGTTCAAACAGATCAAGTGGTTCAGTTGAATCCTCCTATTGACTACCATTCTGTGTTGCTTGAGGAGGGTGAGTTTGTTGTTCCTCCCCCACCAGATGATGAATGGATTCCTCCTCCACCCCCCGATAATGAGCATGTGCCTCCACCACCCCCTGATAATGAGCATGTGCCTCCACCACCACCGCCAGATGATCAGGTGCCTCCTCCACCTGGGGATCCGCTACCACCTTCTTATAGTGTTTTACCATCTTATGCAGAGACAGGGCAACCCCTTTCCTATGCCCAATATACTCTATCTTATCCTGGTGTTGCTGTTGAATATTATGGTCAGACAGCTGCTGAAGTCCCCTGCAGTAATATATATGGACAAATTGCTATCCCCCCGGCACAGATTTACTATAATAGTGCAATTCCTAACATGTATAGTGAAAGTCCTCAAGTTATGATCAATCCAACTGACACCGTTGCTTATTATGATGTTCAAGATGGAGCTGGTTCACAGTCCATACCTGCTATCAATATTAACGGTTCTGGTGTTGGTGAGGCCAACTGGGTATCTAGTGATGTTCCGTCCACCTCATCTAGTATCCATGCACCTGCAACTGTTTCAGTTGATGAAGGTGTTTCATTACCTCCGGCTTCTTCTGAAACTGCTGCAGAAAATAATGCCCCATCAATTGCTTCTAAACCGCAATCAAAAGTTGTACGGACTAGGAAGCGAGCAGTTGCAGTTGGATCCTCGTTAAAGTCTAATAAGAAGGTTTCAAGTTTGGTAGACAAGTGGAAGGCAGCTAAAGAGGAGATGCTTGAAGAAGAGGAAGAAGAACCTGATAGTGTGTATGAGGCCTTAGAAAGAAAGCGCCAAAGGGAAATAGAGGAGTGGCATGCCAAGCAAATTGCAAGCGGAGAGGCCAAAGATAATGCTAATTTTCAGCCTCTAGGTGGTGATTGGCGAGAAAAGGTCAAGCGCAAGAGAGCACAAGCAGCAAAAGAATCTGTTAGCAAACCGCAAGATGCTATTAAGCAAAACCAACAACAGCCTGATCCGAATGAACTCGCCAAGGGTCTCCCAAGTAATTGGCAGGCTTATTGGGATGATAGTACAAAGCAGGTTTATTATGGTAACACCATCACCTCGGAAACAACATGGACTAGGCCAACAAGATGA 2805 0.4314 MGKRKERRLAALSNTGRRLKLDLFAEPSGELGGSTLHGDAGGDTDSQHRDGLPNSPSSSGQESQNPLLLLGQYSDDEGDDRSSRGLNDVNLQSPVLNEEGKGELDDGSKDLNISVSADLVPHNNEQQNAMPNSTSLDVGSCGRNESHGVTENLENGMVSKDQIYVSESFDERVVTDVGLGWKIVMHEESQSYYYWNTETGETSWEVPQVLAPADQLPHASVNDKTEGAAVGDSSSVPSTGMLDTSAAFTTDTSLDATRTSHKELCGHGSQMNGGSVECRSQNQGSDDNGNELTRDDGHMSISEDQHHSSVSKSSIEEQQADIDFPSRLVNQCESLLERLQSLKKSKENLQGQEFLSKYMLEIEIRLSDIRCLASYGSSLLPFWMHSDRKINLLESLINDDLLETGKSSHDEVEDKHVPVSEELGDQLNGMEHESEVDQNNNKGSLLTSDASNGSQVDALAVVVKDINNNLFTNGQHVPSSSSPGSHMESYVEINSKAEAVINPQEPIHKHGYVSSEDVDMDVDMEVEDMNSSDNTTVIDVPVAKDSVQTDQVVQLNPPIDYHSVLLEEGEFVVPPPPDDEWIPPPPPDNEHVPPPPPDNEHVPPPPPPDDQVPPPPGDPLPPSYSVLPSYAETGQPLSYAQYTLSYPGVAVEYYGQTAAEVPCSNIYGQIAIPPAQIYYNSAIPNMYSESPQVMINPTDTVAYYDVQDGAGSQSIPAININGSGVGEANWVSSDVPSTSSSIHAPATVSVDEGVSLPPASSETAAENNAPSIASKPQSKVVRTRKRAVAVGSSLKSNKKVSSLVDKWKAAKEEMLEEEEEEPDSVYEALERKRQREIEEWHAKQIASGEAKDNANFQPLGGDWREKVKRKRAQAAKESVSKPQDAIKQNQQQPDPNELAKGLPSNWQAYWDDSTKQVYYGNTITSETTWTRPTR* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0876 934 MobiDBLite consensus disorder prediction 862 877 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 263 317 - -
Pvu8g0876 934 PANTHER OS06G0298400 PROTEIN 594 933 - -
Pvu8g0876 934 PANTHER OS06G0298400 PROTEIN 1 599 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 289 311 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 882 898 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 218 243 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 48 70 - -
Pvu8g0876 934 CDD WW 180 207 IPR001202 GO:0005515
Pvu8g0876 934 MobiDBLite consensus disorder prediction 843 905 - -
Pvu8g0876 934 SUPERFAMILY WW domain 901 933 IPR036020 GO:0005515
Pvu8g0876 934 ProSiteProfiles WW/rsp5/WWP domain profile. 900 934 IPR001202 GO:0005515
Pvu8g0876 934 SMART ww_5 176 209 IPR001202 GO:0005515
Pvu8g0876 934 SMART ww_5 901 934 IPR001202 GO:0005515
Pvu8g0876 934 Gene3D - 175 217 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 752 781 - -
Pvu8g0876 934 CDD WW 903 933 IPR001202 GO:0005515
Pvu8g0876 934 MobiDBLite consensus disorder prediction 571 628 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 227 243 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 123 142 - -
Pvu8g0876 934 ProSitePatterns WW/rsp5/WWP domain signature. 906 932 IPR001202 GO:0005515
Pvu8g0876 934 Gene3D - 897 934 - -
Pvu8g0876 934 MobiDBLite consensus disorder prediction 273 288 - -
Pvu8g0876 934 ProSitePatterns WW/rsp5/WWP domain signature. 181 207 IPR001202 GO:0005515
Pvu8g0876 934 ProSiteProfiles WW/rsp5/WWP domain profile. 175 209 IPR001202 GO:0005515
Pvu8g0876 934 MobiDBLite consensus disorder prediction 576 623 - -
Pvu8g0876 934 Pfam WW domain 180 207 IPR001202 GO:0005515
Pvu8g0876 934 Pfam WW domain 902 932 IPR001202 GO:0005515
Pvu8g0876 934 MobiDBLite consensus disorder prediction 754 778 - -
Pvu8g0876 934 SUPERFAMILY WW domain 174 210 IPR036020 GO:0005515
Pvu8g0876 934 MobiDBLite consensus disorder prediction 23 109 - -
Pvu8g0876 934 Coils Coil 329 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0876 K24774 - gmx:100791890 1342.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0876 8 8522245 8529013 Pvu8g0876 8 8522245 8529013 ECH