Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0822 ATGGGGAATTGCGTGGCTAAGTCTCAAGCTAAGGATAGTGATTCTGATCATGATGTGGAGTTTGCTGGTGGCAAAGTGAAACTTATTACCACCAAAGAAGCTTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGTGATTGCGAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGGTGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACACATCCATGATGTTCTTGTTAGTTGATGTGGATGAACTAACTGAGTTCAGCACTTCATGGGACATCAAAGCTACACCAACTTTCTTCTTTCTTAAAGAGGGACGACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAGGTTGTTGCCATCAATGATTCACTTCCCGAATACAAGCAGTGA 420 0.4286 MGNCVAKSQAKDSDSDHDVEFAGGKVKLITTKEAWDQYLEEARRDGKIVIANFSATWCGPCKVIAPYYCELSEKYTSMMFLLVDVDELTEFSTSWDIKATPTFFFLKEGRQLDKLVGANKPELQKKVVAINDSLPEYKQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0822 139 SUPERFAMILY Thioredoxin-like 22 127 IPR036249 -
Pvu8g0822 139 CDD TRX_family 33 127 - -
Pvu8g0822 139 Gene3D Glutaredoxin 1 137 - -
Pvu8g0822 139 PRINTS Thioredoxin family signature 49 57 - -
Pvu8g0822 139 PRINTS Thioredoxin family signature 57 66 - -
Pvu8g0822 139 PRINTS Thioredoxin family signature 96 107 - -
Pvu8g0822 139 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Pvu8g0822 139 Pfam Thioredoxin 29 127 IPR013766 -
Pvu8g0822 139 PANTHER THIOREDOXIN 1 136 - -
Pvu8g0822 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Pvu8g0822 139 PANTHER THIOREDOXIN H9 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0822 Pvu-Chr8 7756554 7760708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0822 K03671 - gmx:100813401 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0822 8 7756554 7760708 Pvu8g0822 8 7756554 7760708 ECH
Pvu8g0822 8 7756554 7760708 Pvu10g0607 10 9701005 9703656 PCT