Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0697 ATGTGGAAGGTTGTGCGATTCGCGGCGTCCAGATCGCGGAAATTCTCCACGGCGATTCCCGGGCCGTGCAAGGTCCACAAGCGCGGTACTGATATCCTGCATGATCCTTGGTTCAACAAGGATACTGGGTTTCCCATAACTGAAAGAGATCGATTGGGGCTTCGGGGCCTTCTTCCTCCTCGTGTCATTTCATTTGAGCATCAATATGATCGGTTCATGGATTCATATAGATCTTTGGAGAAGAATACAAAGGGCCAAGCAGATAAATTTGTTTCTTTATCCAAGTGGAGGATCTTAAATAGATTGCATGACAGGAATGAGATTCTCTATTACCGTGTTCTTATCGATAACATCAAAGAGTTTGCTCCAATAATCTATACTCCTACAGTTGGATTAGTGTGTGAAAATTATTCAGGGTTATTTAGACGCCCGCGTGGAATGTATTTTAGTGCCAAAGATAAAGGAGAGATGATGTCAATGATCTATAACTGGCCATCTGACGAGGTAGACATGATTGTCTTGACAGATGGTAGTCGTATTCTTGGCTTGGGTGACCTTGGCGTTCAGGGCATTGGAATACCTATAGGAAAACTTGACATGTATGTTGCTGCTGCTGGTATCAACCCACGAAGAATACTTCCGGTTATGTTAGATGTTGGTACAAACAATGAAAAGCTACTAAAAGATCCCCTTTATTTAGGAGTTCGACAACCTAGGTTGGAAGGTGAAGAGTATCTATCGATTGTTGATGAATTCATGGAAGCTGTACACAATCGATGGCCTAAAGCTATTGTGCAGTTTGAGGATTTCCAAATGAAGTGGGCTTTTGAAACCCTGAAACGATATAGAGAAAGGTTTTGCATGTTTAATGATGATATACAGGGCACGGCTGGTGTTGCACTTGCTGGGCTGTTGGGAACTGTAAGATCCCAAGGTCGACCATTGTCTGATTTTTTGAAACAAAGGATAGTTGTTGTTGGAGCTGGGAGTGCAGGGCTTGGTGTTCTTAAGATGGCTGTCCAGGCTGTTTCAAGAATGTCAGGGGGCAGTGGAACGGTTGCGAACAGCCAATTCTTTTTAATTGATAAAAATGGTCTTGTCACCACGGAAAGGATTAATCTAGATCCAGCTGCAGTTCCATTTGCCAAAAATCCAAGAGATCTTGAAGGGCTTACTGAGGGTGCTAGTATAATTGAAGTGGTTAAGAAGGTTAAGCCACATGTGCTACTTGGATTGTCTGGAGTTGGTGGTGTTTTCGACAAGGAGGTGCTTAAGGCAATGAGAGAATCTGCTTCAACAAAACCTGCTATCTTCGCAATGTCTAATCCCACCGTGAATGCTGAGTGCACTGCTATTGAAGCTTTCAGTCATGCTGGAGAAAATATAGTTTTTGCAAGTGGAAGCCCTTTTGACAATGTAGATCTCGGAAATCAAGTTGGCCATGTCAATCAAGCCAACAACATGTACCTGTTCCCAGGGATTGGTTTGGGTACACTTCTATCGGGTGCTCGTCATATAACAGACGAAATGGTGCGAGCAGCAGCAGAATGCCTTGCTTCATATATGACAGATGAGGAGGTCCAAAAAGGAATCTTGTATCCATCCATTGACTGTATTCGAAATGTTACAGCTGAAGTTGGAGCTGCTGTTATTGGTGCTGCAGTTGCAGAAAAACAAGCTGAAGGTCATGGTGATGTAGGGTTGAGAGAACTATCAAACATGTCAAAAGAGGATACTGTGGAGTATGTGAGAGGCAATATGTGGTACCCTGAGTATTCCCCCCTCGTTCATGAAAAATAA 1800 0.4328 MWKVVRFAASRSRKFSTAIPGPCKVHKRGTDILHDPWFNKDTGFPITERDRLGLRGLLPPRVISFEHQYDRFMDSYRSLEKNTKGQADKFVSLSKWRILNRLHDRNEILYYRVLIDNIKEFAPIIYTPTVGLVCENYSGLFRRPRGMYFSAKDKGEMMSMIYNWPSDEVDMIVLTDGSRILGLGDLGVQGIGIPIGKLDMYVAAAGINPRRILPVMLDVGTNNEKLLKDPLYLGVRQPRLEGEEYLSIVDEFMEAVHNRWPKAIVQFEDFQMKWAFETLKRYRERFCMFNDDIQGTAGVALAGLLGTVRSQGRPLSDFLKQRIVVVGAGSAGLGVLKMAVQAVSRMSGGSGTVANSQFFLIDKNGLVTTERINLDPAAVPFAKNPRDLEGLTEGASIIEVVKKVKPHVLLGLSGVGGVFDKEVLKAMRESASTKPAIFAMSNPTVNAECTAIEAFSHAGENIVFASGSPFDNVDLGNQVGHVNQANNMYLFPGIGLGTLLSGARHITDEMVRAAAECLASYMTDEEVQKGILYPSIDCIRNVTAEVGAAVIGAAVAEKQAEGHGDVGLRELSNMSKEDTVEYVRGNMWYPEYSPLVHEK* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0697 599 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 293 596 IPR036291 -
Pvu8g0697 599 Pfam Malic enzyme, N-terminal domain 103 283 IPR012301 GO:0004471
Pvu8g0697 599 SMART malic_2 103 283 IPR012301 GO:0004471
Pvu8g0697 599 Pfam Malic enzyme, NAD binding domain 293 554 IPR012302 GO:0051287
Pvu8g0697 599 ProSitePatterns Malic enzymes signature. 289 305 IPR015884 GO:0004471
Pvu8g0697 599 PANTHER MALIC ENZYME-RELATED 8 595 - -
Pvu8g0697 599 SMART Malic_M_2 293 555 IPR012302 GO:0051287
Pvu8g0697 599 PANTHER MALIC ENZYME 8 595 - -
Pvu8g0697 599 Gene3D - 291 599 - -
Pvu8g0697 599 Gene3D - 27 290 IPR037062 GO:0004471
Pvu8g0697 599 PIRSF ME 5 598 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 13 292 IPR046346 -
Pvu8g0697 599 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 205 227 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 264 282 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 289 305 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 323 339 IPR001891 GO:0004470|GO:0004471
Pvu8g0697 599 PRINTS Malic enzyme signature 432 448 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0697 Pvu-Chr8 6187596 6194783 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0697 K00028 - gmx:100795823 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0697 8 6187596 6194783 Pvu8g0697 8 6187596 6194783 ECH
Pvu8g0697 8 6187596 6194783 Pvu10g0987 10 34661085 34669279 PCT