LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu8g0575	ATGTTCGGGAACAAAGTGTTTCTAACTTATAAAAGAAAGCGGCAATCTCTAACTAGTAATTTTATCCATGGGAATTGTAACCAACATTCGGCATGTGAAGATGCCCATAATGGCAATCAAACTGTGGAGAAAACATCAGAAAAGCATGAAGAAAAAACAACGGATACTAGTAATGGGAAAGTGCCATGTTTCAAACAGCCGGATTGTTCATCATTGCTTCTGCTTCAAAATACCGGTGACCTTAAGGCAGGAGTACTTGGAAACAATGATGCAACAGAAATGATGGTTACTGCCCATGAATCATTTTCAACAGAGCATCCTTGTGAGGATAACATCAAGAGAGATGATGGTGAGTTGCCTGTAGTAGAAAAGGCTTCAGATAATGATTGCGATACTCAGAGAAATTCATGTGCTGGTGAAAGCTCTCATAATGTATATGACAACTGTTCTAATAAAATTATTTCCCTGCCAGTTGAATTGGGTCCTGGCAATGATTTTAATTTGGTCAACTCAGAAACATTGATCACAAGGGATATCAGTTCTGCGCAAGTCAATACATCTCCTGTTTCAAATAGTTCAATGGATGATCCTACTGATTCACGCTCCAAAGATAATATTAGAAACCCATCTGGAGATATGGTTATTCGGGCCAACTTGACCAGTCCTCTAATAACCTTTAATCGATGTTACAAAAGAAAAAAGGGGTTGGATGGAAATGGCAAGCAAAGCAGCCTTTTGCACACGAAAGAAAACATTTCAGTGTTAACCAAATGGAGTATGCTTGCAAATGATAATCTATGTTCTAGTGATGAATCATCTAGTGAGGAATGTCCTGTAGATAAAGTACCTGACCTTAATCAATCAGTGGAGCTTTCAGAAAGAGGGAAGGCATTGAATGAAACGCAAGATGAAACATCTTGTAGAAGTTGCTCTATATTTTTTGTGGCAGACCTTAATCAATCTGCTGAGCTTACAAAAAGAGGGGAGCTTTGTCAAACTAAAGAAAAAGTCAAAAGTACTGATTCTCCATTTTCCCCTGGAGTTGTTTCTGAAACATGTGTGGCAGACATGAGAGAGAAACTTTGTCATGGGGAAGACTCGGGAAAAAATGCCTCTCATACAGACAGAACAGCAGAACTGAGCCATAGTTGTCTGATTGACAAGGATCATCTTTATAAGGATTGTCAGGGAGTCTCTATCAAAGTTGATTCTAGAGATCCCTATCCTTCAGCCACAGCCACTGATCGGGAACAAGAAAAGTCCCAAATCTTGTGCTGTGAGGCCAATGAACATGGTTTGAGCAATGAAACGATGAAAATTGGTGAAAACCAATCTCGGTTTGACCGGCCTAATAACTCCGGGGAAGAGCACACTGTTGATTTAAACATGGGTGCTGAGAAGCATCCCCTTCATTTGAGTACGAGGGCTCCGGGGTCCAAATTGGAATCTACAAGCAGTAGTTCTGCCATTGCTGAAGATAAAGTTTCTGAACTGGACTTTTTAAACACTAGAAACACACAGCTGATTTCGGAAGGAAAAGCTATAGCTGGTGTTTGCTCAAGTAGTACTCAACCTCAGTTAATGATGACTGAAGAAAGAATGAGGGTTCAACAAACAAAAACCGATAAATCAAAACTGATGCCTTTGATTTCTCTTTCTCTGGGCTTGTCTTTACCTATGGAGCTCAAGACCAGAGGCAGTGATTCTGTTAGTAGTTTGTCTGTCTTCTCTTTGTCAAATTCAACCACTGAAACTAGAGATATTGTCCAAGATGGATTATGTCGGTCATCACCAAACCGGAAACCATTACATCCCAGGAACCAGGTGGTACTTGACAACATTGCACACAGAACAAGAGCTTTAAATGAAAGAGGAAATTTTCAAGAATATTTGAAGCCACATCCTATCAGGTGGTCTGAAGAGGAGTTGGATTTTCTCTGGATTGGTGTAAGGAGACATGGTAGGGGCAATTGGGATGCCATGCTAAGGGATCCTAGATTGCGGTTTTCACCATTAAGGGTACCAGGTGACCTTGCTGAGAGGTGGGAGGATGAACAATTAAAACTTTTGAACGATATTGACGTTCCACAGTTCATGTATCCAGCAGCAGAAAGGGGAGCAGCTGTGGCATCATTGCAAGGAAACTTTTGCTACTTGGATCCTAAATCAAGTCTCTGGGAGAGCAACCCTTTGAAGAAACCTATTACCAGATATAATTTTCAAAGTAACACCACTGCGCACAGTCATAGGCCAACTACTCATTCCAGAAAGGCCAATTACAACAACATAGACAAGTATGAACTAGGATTTTTCAATTCTCCTGGAAGCTTGAGCATTTGCAGGCAGAATGCTTATTCGAATGACTATCCCTTTAATTGTTCAGCTGCGACAAATAATTTGCCCCACTGGCTCAGGGAAGCTGTTAACACTCCTCCAATCATGCCAAATATGGCTGCAGTGTGTTCCTTGAGTTCTCATCCAGAAGTAGGAGCTTCAGATCATTGCTTCAATACCAGCAAGTCATGCTTTGTACCTCCAAATTGGTTCAATGGTTTGAGGGCAAGTGAGCCACACATGCCAAATGGTTCTCACTATTCAACCTATTCAAGAAAGTATGGGGTGGTGAAGATGAACAAATCTGTGGAACATCGTGTCCGGAAACCGGATGACTTGATCATTGTTGATAGTGACACTTCTTCTGAAGAGACTATATCTGATGATAACCGTGCCAGCTTGTAG	2739	0.4107	MFGNKVFLTYKRKRQSLTSNFIHGNCNQHSACEDAHNGNQTVEKTSEKHEEKTTDTSNGKVPCFKQPDCSSLLLLQNTGDLKAGVLGNNDATEMMVTAHESFSTEHPCEDNIKRDDGELPVVEKASDNDCDTQRNSCAGESSHNVYDNCSNKIISLPVELGPGNDFNLVNSETLITRDISSAQVNTSPVSNSSMDDPTDSRSKDNIRNPSGDMVIRANLTSPLITFNRCYKRKKGLDGNGKQSSLLHTKENISVLTKWSMLANDNLCSSDESSSEECPVDKVPDLNQSVELSERGKALNETQDETSCRSCSIFFVADLNQSAELTKRGELCQTKEKVKSTDSPFSPGVVSETCVADMREKLCHGEDSGKNASHTDRTAELSHSCLIDKDHLYKDCQGVSIKVDSRDPYPSATATDREQEKSQILCCEANEHGLSNETMKIGENQSRFDRPNNSGEEHTVDLNMGAEKHPLHLSTRAPGSKLESTSSSSAIAEDKVSELDFLNTRNTQLISEGKAIAGVCSSSTQPQLMMTEERMRVQQTKTDKSKLMPLISLSLGLSLPMELKTRGSDSVSSLSVFSLSNSTTETRDIVQDGLCRSSPNRKPLHPRNQVVLDNIAHRTRALNERGNFQEYLKPHPIRWSEEELDFLWIGVRRHGRGNWDAMLRDPRLRFSPLRVPGDLAERWEDEQLKLLNDIDVPQFMYPAAERGAAVASLQGNFCYLDPKSSLWESNPLKKPITRYNFQSNTTAHSHRPTTHSRKANYNNIDKYELGFFNSPGSLSICRQNAYSNDYPFNCSAATNNLPHWLREAVNTPPIMPNMAAVCSLSSHPEVGASDHCFNTSKSCFVPPNWFNGLRASEPHMPNGSHYSTYSRKYGVVKMNKSVEHRVRKPDDLIIVDSDTSSEETISDDNRASL*	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	181	196	-	-
	Pvu8g0575	912	PANTHER	CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED	1	911	-	-
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	40	56	-	-
	Pvu8g0575	912	PANTHER	PROTEIN CHROMATIN REMODELING 4-LIKE	1	911	-	-
	Pvu8g0575	912	Gene3D	-	603	692	-	-
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	449	464	-	-
	Pvu8g0575	912	ProSiteProfiles	Myb-like domain profile.	637	686	IPR001005	-
	Pvu8g0575	912	SUPERFAMILY	Homeodomain-like	635	683	IPR009057	-
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	181	211	-	-
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	40	59	-	-
	Pvu8g0575	912	MobiDBLite	consensus disorder prediction	435	489	-	-
	Pvu8g0575	912	CDD	SANT_TRF	636	682	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu8g0575	-		-	var:108328902	1469.14

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu8g0575	8	5050473	5058020	Pvu8g0575	8	5050473	5058020	ECH