Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0563 ATGGTGATGGCACACACCACACCCCTCCACTGTTTATGGCACCCCTTCACTCTCCTCTCTGTGATTCTTCTCTGTGCAATCCCTTCACTCTCAATTGATGTTCACCTACAAGACAGAGCCTCTCTTCTTCTGTTCAGGTCAAGGCTGCAAGACCCCTACCAGAGTTTGTCCAACTGGGCAGGCTCCAACTGCACTTCATGGAGTGGAATCACCTGTGACAACAGAACTGGGAGGGTGCTTTCCATCAACCTAACTAGTATGAACCTGTCAGGCCAAATCCACCCCAGTTTGTGCCAGCTTTCATACCTCAGCAAGGTGGGGTTGTCCCACAATAACTTCACTTCCCTCCTTCCTGAATGTTTTGGAAATTTGCTCAACCTAAGAGCTATTGATCTCAGCCATAACAGGTTTCACGGTGGGATACCAGACTCTTTCATGAGGCTCAGGCACCTCACTGAGCTTGTTTTGAGCGGGAACCCTGGTTTGGGTGGTCCACTGCCTGCTTGGATTGGAAACTTCTCCACAAATCTGGAAAGGCTACATCTTGGTGTCTGTTCATTCAGTGGGGACATACCTGAGAGTTTGCTTTACTTGAAGTCCCTCAAGTATTTGGACCTTGAGAACAATCTCTTGTCTGGTAATCTGGTTGGTTTTCAGCAGCCTCTGATTTTGCTCAATCTTGCTTCCAATCAGTTTGCTGGTACTTTGCCTTGCTTTTCAGCTTCAGTTCAGTCTCTAACTGTGTTGAATTTGTCTAACAATTCTATTGTGGGGGGACTGCCTGCTTGTATTGCTTCCTTGCAAGCTTTAACTCATTTGAACCTGTCAGGGAACCATTTGAGGTATAGAATATATCCTAGGCTTGTGTTTTCAGAGAAACTTCTTGTTTTGGACTTGAGTTATAATGATTTTTCTGGTCCTATTCCCAGTAAAATTGCTGAGACTACCGAGAAACTTGGCCTTGTTCTTCTTGACCTTTCTCACAATCAATTCTCTGGTGAAATTCCTGTGAAAATTACTGAGTTGAAAAGTTTGCAGGCCTTGTTTCTCTCTCACAATCTTCTCTCTGGAGAAATTCCTGCCAGAATTGGAAATTTGACCTATCTTCAGGTCATTGATCTCTCACACAACTCTTTGTCTGGTACCATTCCATTCAGCATTGTTGGGTGCTTTCAGCTGTATGCTCTAATACTGAATAACAACAATCTTTCTGGTGTAATTCAACCGGAGTTTGATGCATTGGATATCTTGAGGATACTGGATATAAGCAACAACAGGTTTTCCGGGGCTATCCCACTCACTCTGGCTGGATGTAAATCTCTCGAGATTGTAGATTTTAGTTCCAATGAGCTTTCTGGATCCTTGAATGATGCAATAACGAAATGGTCAAACCTCAGGAATGTCACTGTTAAAGAGCCATTGGTTGCAGCAAGAAATGTTCAACTGAGAGTTTCAGCTGTTGTTTCTGATAGCAATCAACTCAGTTTTACTTATGATCTATCCTCAATGATTGGAATCGATCTATCCAGCAACTTGCTCCACGGAGAGATTCCAAGGGGCTTATTTGGTCTAGCTGGTCTAGAATATCTGAATTTGTCATGCAACTTTCTCTATGGACAGCTTCCAGGTCTGCAGAAAATGCAGAGTTTGAAAGCCTTAGATTTGTCAAATAATTCCTTGTCAGGACATATCCCAGGAAACATTTCTAGCCTTCAAGATCTGTCCATTTTGAATCTGTCTTACAACTGTTTTTCTGGGTATGTTCCCCAGAAGCAAGGATATGGGAGATTTCCTGGTGCATTTGCTGGAAATCCGGATCTGTGCATGGAATCTTCCAGTGGAGTATGTGATGATGGAAGGACTCAATCTGTGCAAGGAAGTTCTTTCAGGGAAGATAGGATGGAGGGACCAATATCTCTGGGGATTTTCTTTATCAGTGCCTTTGTTAGTTTTGATTTCGGTGTTGTTGTTCTCTTCTGTTCAGCAAGGGCAAGAAATTACATTCTTCAAACCAAAGTTTGA 2022 0.4313 MVMAHTTPLHCLWHPFTLLSVILLCAIPSLSIDVHLQDRASLLLFRSRLQDPYQSLSNWAGSNCTSWSGITCDNRTGRVLSINLTSMNLSGQIHPSLCQLSYLSKVGLSHNNFTSLLPECFGNLLNLRAIDLSHNRFHGGIPDSFMRLRHLTELVLSGNPGLGGPLPAWIGNFSTNLERLHLGVCSFSGDIPESLLYLKSLKYLDLENNLLSGNLVGFQQPLILLNLASNQFAGTLPCFSASVQSLTVLNLSNNSIVGGLPACIASLQALTHLNLSGNHLRYRIYPRLVFSEKLLVLDLSYNDFSGPIPSKIAETTEKLGLVLLDLSHNQFSGEIPVKITELKSLQALFLSHNLLSGEIPARIGNLTYLQVIDLSHNSLSGTIPFSIVGCFQLYALILNNNNLSGVIQPEFDALDILRILDISNNRFSGAIPLTLAGCKSLEIVDFSSNELSGSLNDAITKWSNLRNVTVKEPLVAARNVQLRVSAVVSDSNQLSFTYDLSSMIGIDLSSNLLHGEIPRGLFGLAGLEYLNLSCNFLYGQLPGLQKMQSLKALDLSNNSLSGHIPGNISSLQDLSILNLSYNCFSGYVPQKQGYGRFPGAFAGNPDLCMESSSGVCDDGRTQSVQGSSFREDRMEGPISLGIFFISAFVSFDFGVVVLFCSARARNYILQTKV* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0563 673 Gene3D Ribonuclease Inhibitor 37 149 IPR032675 -
Pvu8g0563 673 PANTHER 3, PUTATIVE-RELATED 22 470 - -
Pvu8g0563 673 PANTHER 3, PUTATIVE-RELATED 492 673 - -
Pvu8g0563 673 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Pvu8g0563 673 Pfam Leucine rich repeat 225 280 IPR001611 GO:0005515
Pvu8g0563 673 PRINTS Leucine-rich repeat signature 369 382 - -
Pvu8g0563 673 PRINTS Leucine-rich repeat signature 547 560 - -
Pvu8g0563 673 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Pvu8g0563 673 Gene3D Ribonuclease Inhibitor 219 618 IPR032675 -
Pvu8g0563 673 Pfam Leucine Rich Repeat 549 571 IPR001611 GO:0005515
Pvu8g0563 673 SMART LRR_typ_2 414 437 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 243 266 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 100 123 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 342 366 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 500 524 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 547 571 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 198 220 IPR003591 -
Pvu8g0563 673 SMART LRR_typ_2 267 292 IPR003591 -
Pvu8g0563 673 Gene3D Ribonuclease Inhibitor 150 218 IPR032675 -
Pvu8g0563 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 492 673 - -
Pvu8g0563 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 470 - -
Pvu8g0563 673 ProSiteProfiles Leucine-rich repeat profile. 549 571 IPR001611 GO:0005515
Pvu8g0563 673 SUPERFAMILY RNI-like 291 586 - -
Pvu8g0563 673 SUPERFAMILY L domain-like 36 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0563 Pvu-Chr8 4965940 4968114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0563 150 646 Receptor kinase-like Gene Family AT1G08590 28.143 3.99e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0563 - - gmx:100798103 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0563 8 4965940 4968114 Pvu8g0563 8 4965940 4968114 ECH