Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0562 ATGGCGTCGGTGTTTGTGTACCACGTGGTGGGCGATCTGACGGTGGGGAAGCCGGAGCTGGTGGAGTTTCACGAGAGTGAGACGGTGGAGTCCGCGATTAGGGCGATCGGAGAGTCCCCTGAAGGGAGCATACCCATTTGGAAAAAGAGATCTCATGTGGGGATTGAGAATAGTGAGATGAGGCAGCAGAGGTTTGTTGGTATCCTTAGTTCTTTTGACATAGTTGCGTTTTTGGCTAAGAGTCAGTGTTTGGAGGATCAGGACAAGGCCTTGAAGATTCCTGTTTCTGAGGTTGTTGTTCCTAACAATTCGCTGCTCAGGCTTGTTGACCCTGCTACAAGGTTGATAGATGCGCTAGACATGATGAAACAAGGTGTGAAACGTCTGCTTGTTCCGAAGAGTGTAGCATGGAAGGGCATGAGTAAGCGATTCTCAGTTATCTACTACGGCAAGTGGCTCAAGAATAATGATTCTCCGAGCAACAGCAGCAACAATCTACCTCCTAACTTGAATTGGAGCCCCTCAACTTCGGGCACTGTTATCCGTGATAAGTACTGTTGTCTCTCTAGAGAAGATGTTCTCCGTTTCATCATTGGTTGTCTTGGCGCTTTGGCTCCCCTTCCTCTCACTTCCATTGTTGCTCTTGGAGCAATTAATGCAGACTACAGCTATATTGAATCCTCTACTCCAGCCATTGCAGCCACTAAAAAGCTTCCTCAAGATCCAAGTGCAGTTGCTGTGACAGAAAACACACCAGATGGTCAGTGTAAGATCCTTGGAGAAATTTCTGCATGCAAGTTATGGAAATGCGATTACTTAGCAGCAGCATGGGCTTTGGCGAATCTCTCGGCTGGACAGTTTGTCATGGGAGTTGAAGATAATGTTAGCTCAAGGTCACTGCCTGAGTTCAGTGTAGATTCTCCAACTGGAAACAGTGATTTAGTTAATGGTTCAAGGAAACCAAGGAAATTCAGTAGCAGGAGTATTGGTTTCTTCAGCAATTCTGGGAGCCACAGTTTTGGTTCCAGGAGCATGTATAGGGGTAGGAGTGCTCCTCTGACATGTAAACTCACTAGTTCACTGGCTGCAGTCTTGGCTCAGATGCTATCCCACAGGGCAACTCATGTTTGGGTGACCGAGGACGAGAATGACGAGGTTTTGGTCGGTGTGGTTGGATATACTGATATTTTAGCTGCTGTAACCAAATCACCTACAGCCATGATTCCTGTTAATAGATCTACAGAGGGGTTTGGAAATGAAATTCAGTGTTGA 1272 0.4662 MASVFVYHVVGDLTVGKPELVEFHESETVESAIRAIGESPEGSIPIWKKRSHVGIENSEMRQQRFVGILSSFDIVAFLAKSQCLEDQDKALKIPVSEVVVPNNSLLRLVDPATRLIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNNDSPSNSSNNLPPNLNWSPSTSGTVIRDKYCCLSREDVLRFIIGCLGALAPLPLTSIVALGAINADYSYIESSTPAIAATKKLPQDPSAVAVTENTPDGQCKILGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVSSRSLPEFSVDSPTGNSDLVNGSRKPRKFSSRSIGFFSNSGSHSFGSRSMYRGRSAPLTCKLTSSLAAVLAQMLSHRATHVWVTEDENDEVLVGVVGYTDILAAVTKSPTAMIPVNRSTEGFGNEIQC* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0562 423 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 411 - -
Pvu8g0562 423 MobiDBLite consensus disorder prediction 300 320 - -
Pvu8g0562 423 SMART cbs_1 19 79 IPR000644 -
Pvu8g0562 423 SMART cbs_1 351 401 IPR000644 -
Pvu8g0562 423 SUPERFAMILY CBS-domain pair 6 133 IPR046342 -
Pvu8g0562 423 SUPERFAMILY CBS-domain pair 351 401 IPR046342 -
Pvu8g0562 423 Gene3D - 332 402 IPR046342 -
Pvu8g0562 423 CDD CBS_pair_SF 23 131 - -
Pvu8g0562 423 Pfam CBS domain 351 400 IPR000644 -
Pvu8g0562 423 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX6 1 411 - -
Pvu8g0562 423 Gene3D - 5 135 IPR046342 -
Pvu8g0562 423 ProSiteProfiles CBS domain profile. 345 407 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0562 Pvu-Chr8 4957868 4960850 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0562 - - ccaj:109814707 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0562 8 4957868 4960850 Pvu8g0562 8 4957868 4960850 ECH