Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0561 ATGATAGGGTGGGAAGATGTGTACAAAGTGGTAGTGGCAGTGGTGCCACTGTATGTTGCTCTAGTGTTAGGATATGGTTCAGTGAAGTGGTGGAAGATCTTCACTAGGGAGCAATGTGAGGCAATAAACAAGCTAGTATGTTACTTCACTTTGCCACTCTTTACTTTTGAGTTCACTGCTCACATCGACCCTTTCAAAATGAACTTTTCGTTCATAGCTGCAGACACCATATCAAAGTTCATCATCATGCTGGTGCTTGCCCTTTGGGCCAAGTGCACTAAAGGGAGTTTCTGCTGGTCTATAACCAGCTTCTCTTTGTGCACTCTCACCAACGCTCTTGTTGTTGGGGTTCCAATGGTCAAGCCCATGTATGGAGCCCTTGGCGAGGACCTAGTGGTCCAGTCCTCAGTGGTGCAGGCCATCATATGGCTCACTTTTCTTCTCTTTGTCTTGGAGTTTCGTAGAACAGCAATTGAGGGAACCACCAACACCTTTAAACCCAAATCAAAAGCAATGATTGTTGACAGCAATACTAATAATAAGACAGGTGAAGGTGGAATGGGAAAAGATGTGGAGGAAAATACTGTAGCTATTGATGTGAAAGAGGAGTTGGCGTTAGAAGAAACTGTTAGTAGTAGGATTCCCCTTTGCAAGTTGATGAAACTTGTGTGGATCAAACTTGTTATGAACCCAAACTCCTACGGCTGTGTCATTGGCATTTCCTGGGCCTTCATATCCAACAGGTGGAATTTGGAGATGCCAAGTATGTTAGAGGGGTCTATACAGATCATGTCAAAGGCAGGGACGGGAACTGCTATGTTTAGCATGGGTATTTTCATGGCACTTCAGGATAAGTTGATTGCTTGTGGACCAAGTCTGACTGTATTTGGTTTAGTTTTAAAGTTCATTGCGGGCCCTGCAGCCATGGCCATTGGTGCCATCGCTGTAGGATTGCACGGTGACGTCTTGAGAGTTGCCATCATTCAGGCTGCTGTGCCACAATCCATCACATCCTTCATTTTTGCTAAAGAATATGGATTGCATCCAGAGGTTCTCAGCACTGCGGTGATCTTTGGCATGATTATTTCACTTCCCATCTTAGTTGCCTACTATGGAATATTGGAGTTGATACACTAA 1137 0.445 MIGWEDVYKVVVAVVPLYVALVLGYGSVKWWKIFTREQCEAINKLVCYFTLPLFTFEFTAHIDPFKMNFSFIAADTISKFIIMLVLALWAKCTKGSFCWSITSFSLCTLTNALVVGVPMVKPMYGALGEDLVVQSSVVQAIIWLTFLLFVLEFRRTAIEGTTNTFKPKSKAMIVDSNTNNKTGEGGMGKDVEENTVAIDVKEELALEETVSSRIPLCKLMKLVWIKLVMNPNSYGCVIGISWAFISNRWNLEMPSMLEGSIQIMSKAGTGTAMFSMGIFMALQDKLIACGPSLTVFGLVLKFIAGPAAMAIGAIAVGLHGDVLRVAIIQAAVPQSITSFIFAKEYGLHPEVLSTAVIFGMIISLPILVAYYGILELIH* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0561 378 Pfam Membrane transport protein 10 371 IPR004776 GO:0016021|GO:0055085
Pvu8g0561 378 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 376 - -
Pvu8g0561 378 Gene3D - 224 374 IPR038770 -
Pvu8g0561 378 PANTHER AUXIN EFFLUX CARRIER COMPONENT 5 1 376 - -
Pvu8g0561 378 TIGRFAM 2a69: auxin efflux carrier 1 375 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0561 Pvu-Chr8 4938443 4940902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0561 1 355 Organic Solute Cotransporters AT5G16530 66.854 1.57e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0561 K13947 - gmx:100784879 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0561 8 4938443 4940902 Pvu8g0561 8 4938443 4940902 ECH