Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0547 ATGGAGCCCGGCGACTGCCACGGCGACCACAGTGCCGTGTCTGCTCTGTTCCAGGGAGGGGTTAAAAGAGTTGTGATTGGAATGAGGCATCCCTTGCAACATCTCCGTGGCAATGCTGTGCGTGCACTCAGAAATCAAGGACTGCATGTTGATATTCTCGGAGAGGATCTCACTAGTAATCTCATCGAGGATGCACAAAGAGAGTGTCTTCTTGTAAATGCACCTTTGATTTGTAGAGCTGCTTCGCGTGTTCCCTTTTCTGTTCTCAAGTATGCTATGACCCTTGATGGAAAAATTGCTGCTAGCAGTGGCCATGCGTCATGGATAAGCTGCAAGCAGTCTAGAAATCTAGTGTTTGAGCTACGGGGTAGAAGTGATGCTGTCATTGTGGGAGGAAATACGGTTCGAAGGGACAATCCAAGACTAACAGCCAGACATGGAGGGGGGCATATGCCAATGCGCATTGTGATGACCCAGACGCTTGATCTTCCAGAGGAAGCAAACCTGTGGGACATGGCTGAGGTTTCTACCATAGTTGTAACACAAAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCATCTAAAGGAGTTGAGGTTGTGGAGTTTGACATATTGACTCCCCGAGAAGTTATGGAGTATTTCCACGATCGTGGTTATCTTTCAATTTTATGGGAATGTGGAGGAACACTGGCGGCCTCTGCTATTTCATCTGGAGTAATTCACAAGGTTTATGCTTTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCTCCTGTGGGAGATCTTGGGATGGTTGAGATGACACAGGCTTTAAATCTAATTGATGTTTGCTACGAGCAGGTTGGACCCGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGACATGATACCTGTAATCCCATCACGTGATGAAACTTTTGTTGTTGATCCTACTGTCTCACCATATGAGTCAAGGATCATATTTTTCTATAAAACATGGGATCTTTACGGTGCATTATCAAATTTCTCTCCTCATCCCATTCAAATGGGTGATGAAAATGGTGATTATGTTACTTGGTTGAGTGTTGAGCATTACTACCAGGCACACAAGTTTGTTGGGGTAGATGATCCTATGGCACAAGATTGCGTTGAAAGGATTAAATCTGCAAAAAGTCCAGAAGAAGCTGCAAGAATAGGACGGTCAATGCAAAAGCAGAAACCTAATCTGATAAGATCTGACTGGGAGAACATAAAGATCGATGTCATGTACAAGGCACTGAAATGCAAGTTCTCAATCTACCCGCATTTGAAAACTATGCTTCTATCCACTGCCGGTTCTGTTCTAGTTGAGGCTTCACCTCATGATCTGTTTTGGGGTGGAGGCCGAGAGGGAGAAGGCTTAAATTATCTTGGCAGACTGTTGATGAAATTGAGATCTGAGTTTCTTGGGGAGTCTTCATCATCAAGTGAGGCCCCTAGTTTAACTGTATAG 1485 0.4471 MEPGDCHGDHSAVSALFQGGVKRVVIGMRHPLQHLRGNAVRALRNQGLHVDILGEDLTSNLIEDAQRECLLVNAPLICRAASRVPFSVLKYAMTLDGKIAASSGHASWISCKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMAEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILTPREVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNAPSPVGDLGMVEMTQALNLIDVCYEQVGPDMLISGFLQPLPDMIPVIPSRDETFVVDPTVSPYESRIIFFYKTWDLYGALSNFSPHPIQMGDENGDYVTWLSVEHYYQAHKFVGVDDPMAQDCVERIKSAKSPEEAARIGRSMQKQKPNLIRSDWENIKIDVMYKALKCKFSIYPHLKTMLLSTAGSVLVEASPHDLFWGGGREGEGLNYLGRLLMKLRSEFLGESSSSSEAPSLTV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0547 494 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1 313 - -
Pvu8g0547 494 Gene3D Dihydrofolate Reductase, subunit A 77 293 IPR024072 -
Pvu8g0547 494 Pfam RibD C-terminal domain 87 289 IPR002734 GO:0008703|GO:0009231
Pvu8g0547 494 Gene3D - 316 486 IPR037238 -
Pvu8g0547 494 SUPERFAMILY YbiA-like 312 481 IPR037238 -
Pvu8g0547 494 SUPERFAMILY Dihydrofolate reductase-like 84 291 IPR024072 -
Pvu8g0547 494 CDD NADAR 324 476 IPR012816 -
Pvu8g0547 494 TIGRFAM ribofla_fusion: conserved hypothetical protein 325 478 IPR012816 -
Pvu8g0547 494 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRR, CHLOROPLASTIC 1 313 - -
Pvu8g0547 494 Pfam NADAR domain 326 479 IPR012816 -
Pvu8g0547 494 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 14 289 IPR004794 GO:0008835|GO:0009231
Pvu8g0547 494 TIGRFAM ribD_Cterm: riboflavin-specific deaminase C-terminal domain 84 290 IPR011549 GO:0008703|GO:0009231|GO:0050661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0547 K11752 - gmx:100801283 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0547 8 4791246 4795442 Pvu8g0547 8 4791246 4795442 ECH